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 Protein Homology/analogY Recognition Engine V 2.0


 

Fold library entry viewer: c8dvrA_

Fold library idPDB HeaderMoleculeTitle
c8dvrA_3.30PDB header: hydrolase/rnaChain: A: PDB Molecule: antiviral innate immune response receptor rig-i;


Added to library: Sat Nov 5 11:16:19 2022
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence KPRNYQLELALPAMKGKNTIICAPTGCGKTFVSLLICEHHLKKFPQGQKGKVVFFANQIPVYEQQKSVFS
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TS

B

B
SSSS
TT





SS
 .........80.........90.........100.........110.........120.........130.........140
Sequence KYFERHGYRVTGISGATAENVPVEQIVENNDIIILTPQILVNNLKKGTIPSLSIFTLMIFDECHNTSKQH
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Known secondary structure (DSSP) TTSS







TTT
SS

T
SS



SSS

GGG
SBTGGGTTSS
 .........150.........160.........170.........180.........190.........200.........210
Sequence PYNMIMFNYLDQKLGGSSGPLPQVIGLTASVGVGDAKNTDEALDYICKLCASLDASVIATVKHNLEELEQ
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Known secondary structure (DSSP) TTT

S

B

BS




S

ST
SB



SS

TTGGG
 .........220.........230.........240.........250.........260.........270.........280
Sequence VVYKPQKFFRKVESRISDKFKYIIAQLMRDTESLAKRICKDLENLSQIQNREFGTQKYEQWIVTVQKACM
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Known secondary structure (DSSP) S




B





S

TTT
TT

S



TTST
 .........290.........300.........310.........320.........330.........340.........350
Sequence VFQMPDKDEESRICKALFLYTSHLRKYNDALIISEHARMKDALDYLKDFFSNVRAAGFDEIEQDLTQRFE
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Known secondary structure (DSSP) T


TTSSS
TT

S
 .........360.........370.........380.........390.........400.........410.........420
Sequence EKLQELESVSRDPSNENPKLEDLCFILQEEYHLNPETITILFVKTRALVDALKNWIEGNPKLSFLKPGIL
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Known secondary structure (DSSP) T
GGG


TT


SSGGG
TT

S





 .........430.........440.........450.........460.........470.........480.........490
Sequence DHNILIATSVAQCNLVILYEYVGRARGSKCFLLTSNAGVIEKEQINMYKEKMMNDSILRLQTWDEAVFRE
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Known secondary structure (DSSP)

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T



SSS
S
S
 .........500.........510.........520.........530.........540.........550.........560
Sequence KILHIQTHEKFIRDSQEKPKPVPDKENKKLLCRKCKALACYTADVRVIEECHYTVLGDAFKECFVSRPHP
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Known secondary structure (DSSP) S






B
S


TTT

GGGSSSS


TS
S
 .........570.........580.........590.........600.........610.........620.........630
Sequence KPKQFSSFEKRAKIFCARQNCSHDWGIHVKYKTFEIPVIKIESFVVEDIATGVQTLYSKWKDFHFEKIPF
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Known secondary structure (DSSP) S



SS

SSS


B
SSSS

GGG

SSS



SSTTT

B


 .....
Sequence DPAEM
Predicted secondary structure

SS confidence




Known secondary structure (DSSP)
TTT


Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


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Accessibility Statement
Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
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