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 Protein Homology/analogY Recognition Engine V 2.0


 

Fold library entry viewer: c8dveA_

Fold library idPDB HeaderMoleculeTitle
c8dveA_UNKPDB header: Blank PDB headerPDB COMPND:


Added to library: Sat Jun 3 17:41:48 2023
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence VQFLRTDDEVVLQCSATVLKEQLKLCLAAEGFGNRLCFLEPTSNAQNVPPDLAICCFTLEQSLSVRALQE
Predicted secondary structure
























SS confidence





































































Known secondary structure (DSSP)

B

SS
TT

SSS

B


TTTS



TTT

 .........80.........90.........100.........110.........120.........130.........140
Sequence MLANGHRTLLYGHAILLRHAHSRMYLSCLTTSRKLAFDVGLQEDATGEACWWTMHPASKQRSEGEKVRVG
Predicted secondary structure































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Known secondary structure (DSSP)





BTT
TTT





SS

SSSSSSTTS
TTSB
BTT
 .........150.........160.........170.........180.........190.........200.........210
Sequence DDLILVSVSSERYLHLSTASGELQVDASFMQTLWNMNPICSCCEEGYVTGGHVLRLFHGECLTISAADSD
Predicted secondary structure




































SS confidence





































































Known secondary structure (DSSP)
SSTT
B


SSS


B
SS








TTB
BTT


B


SS
T
 .........220.........230.........240.........250.........260.........270.........280
Sequence DQRRLVYYEGGAVCTHARSLWRLEPLRISWSGSHLRWGQPLRIRHVTTGRYLALTEDQGLVVVDACKAHT
Predicted secondary structure























SS confidence





































































Known secondary structure (DSSP) TTT
S


SGGGTSGGGS
STTTTSB

TT

TTTT

TTTSSTTS

 .........290.........300.........310.........320.........330.........340.........350
Sequence KATSFCFRVSKEEGMGPPEIKYGESLCFVQHVASGLWLTYAALKKKAILHQEGHMDDALFLTRCQQEESQ
Predicted secondary structure


























SS confidence





































































Known secondary structure (DSSP) SS



S



SBTTT

BSSS






BSS

TT



 .........360.........370.........380.........390.........400.........410.........420
Sequence AARMIHSTAGLYNQFIKGLDSFSGKPRPALPIEAVILSLQDLIGYFEPPSEELQHEEKQSKLRSLRNRQS
Predicted secondary structure












SS confidence





































































Known secondary structure (DSSP) TTT






T



TTS
 .........430.........440.........450.........460.........470.........480.........490
Sequence LFQEEGMLSLVLNCIDRLNVYTTAAHFAEYAGEEAAESWKEIVNLLYELLASLIRGNRANCALFSTNLDW
Predicted secondary structure





SS confidence





































































Known secondary structure (DSSP) TTTTS
ST
TTT
GGGSS
 .........500.........510.........520.........530.........540.........550.........560
Sequence VVSKLDRLEASSGILEVLYCVLIESPEVLNIIQENHIKSIISLLDKHGRNHKVLDVLCSLCVCNGVAVRS
Predicted secondary structure














SS confidence





































































Known secondary structure (DSSP) T
STT
ST

S


TT
 .........570.........580.........590.........600.........610.........620.........630
Sequence NQDLITENLLPGRELLLQTNLINYVTSIRPNIFVGRAEGSTQYGKWYFEVMVDEVVPFLTAQATHLRVGW
Predicted secondary structure































SS confidence





































































Known secondary structure (DSSP) TGGG
SSS


S



SS



S

S
SSSS



 .........640.........650.........660.........670.........680.........690.........700
Sequence ALTEGYSPYPGGGEGWGGNGVGDDLYSYGFDGLHLWTGHVARPVTSPGQHLLAPEDVVSCCLDLSVPSIS
Predicted secondary structure






















































SS confidence





































































Known secondary structure (DSSP) TTT



SS

BTTS


GGGSTTS
SSSSS



SS
S


TTTTTT
 .........710.........720.........730.........740.........750.........760.........770
Sequence FRINGCPVQGVFEAFNLDGLFFPVVSFSAGVKVRFLLGGRHGEFKFLPPPGYAPCHEAVLPRERLRLEPI
Predicted secondary structure


























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Known secondary structure (DSSP) TT
SS




S
S



TTTB

SS


TT
GGGG

SSS


T
 .........780.........790.........800.........810.........820.........830.........840
Sequence KEYRREGPRGPHLVGPSRCLSHTDFVPIVLPPHLERIREKLAENIHELWALTRILPEPERNYNLQMSGET
Predicted secondary structure



























SS confidence





































































Known secondary structure (DSSP) T
S

SSS
















T
 .........850.........860.........870.........880.........890.........900.........910
Sequence LKTLLALPAQTTLVDRLAENGHNVWARDRVAQGWSYSAVQDIPARRNPRLVPYRLLDEATKRSNRDSLCQ
Predicted secondary structure

























SS confidence





































































Known secondary structure (DSSP)

TT

SS

TTTTTT
S
TTTS
 .........920.........930.........940.........950.........960.........970.........980
Sequence AVRTLLGYGYNIEPDRVRIFRAEKSYTVQSGRWYFEFEAVTTGEMRVGWARPELRPDVELGADELAYVFN
Predicted secondary structure






























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Known secondary structure (DSSP) T








GGG
B
SSSS
SS

SS

SSS
TTTSSS
 .........990.........1000.........1010.........1020.........1030.........1040.........1050
Sequence GHRGQRWHLGSEPFGRPWQSGDVVGCMIDLTENTIIFTLNGEVLMSDSGSETAFREIEIGDGFLPVCSLG
Predicted secondary structure


































SS confidence





































































Known secondary structure (DSSP) TTTTSSS

S



TT
TTTT

TT


TT

S
SS


TT
B
 .........1060.........1070.........1080.........1090.........1100.........1110.........1120
Sequence PGQVGHLNLGQDVSSLRFFAICGLQEGFEPFAINMQRPVTTWFSKSLPQFEPVPPEHPHYEVARMDGTVD
Predicted secondary structure









































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Known secondary structure (DSSP) TT


SSGGG
SSTTTTTTTTT
TTSS
SS



S


TT
SS


SS
 .........1130.........1140.........1150.........1160.........1170.........1180.........1190
Sequence TPPCLRLAHRTWGSQNSLVEMLFLRLSLPVQFHQHFRDDPEIILNTTTYYYSVRVFAGQEPSCVWVGWVT
Predicted secondary structure































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Known secondary structure (DSSP) S

TTSSSSSS




B

BSS


SS






TTS
GGG
 .........1200.........1210.........1220.........1230.........1240.........1250.........1260
Sequence PDYHQHDMNFDLSKVRAVTVTMGDEQGNVHSSLKCSNCYMVWGGDFVHTDLVIGCLVDLATGLMTFTANG
Predicted secondary structure







































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Known secondary structure (DSSP) SS




SS

STTS

TT

S



TTTSTT
 .........1270.........1280.........1290.........1300.........1310.........1320.........1330
Sequence KESNTFFQVEPNTKLFPAVFVLPTHQNVIQFELGKQKNIMPLSAAMFLSERKNPAPQCPPRLEVQMLMPV
Predicted secondary structure







































SS confidence





































































Known secondary structure (DSSP)

SS



SS



TTSSSTTTT

S



TT

BS
 .........1340.........1350.........1360.........1370.........1380.........1390.........1400
Sequence SWSRMPNHFLQVETRRAGERLGWAVQCQDPLTMMALHIPEENRCMDILELSERLDLQRFHSHTLRLYRAV
Predicted secondary structure




























SS confidence





































































Known secondary structure (DSSP)

SS



TTB



TTTTGGGGGT
 .........1410.........1420.........1430.........1440.........1450.........1460.........1470
Sequence CALGNNRVAHALCSHVDQAQLLHALEDAHLPGPLRAGYYDLLISIHLESACRSRRSMLSEYIVPLTPETR
Predicted secondary structure


















SS confidence





































































Known secondary structure (DSSP) T
SS
S

SSS
TSS


 .........1480.........1490.........1500.........1510.........1520.........1530.........1540
Sequence AITLFPPRHGLPGVGVTTSLRPPHHFSPPCFVAALPAPARLSPAIPLEALRDKALRMLGEAVRDGGQHAR
Predicted secondary structure














































SS confidence





































































Known secondary structure (DSSP)

SS





TT
S










B


SSS








B



ST
S
 .........1550.........1560.........1570.........1580.........1590.........1600.........1610
Sequence DPVGGSVEFQFVPVLKLVSTLLVMGIFGDEDVKQILKMIEPEVFTEEEGLLQMKLPESVKLQMCNLLEYF
Predicted secondary structure





















SS confidence





































































Known secondary structure (DSSP) S
GGGST








TTTS


 .........1620.........1630.........1640.........1650.........1660.........1670.........1680
Sequence CDQELQHRVESLAAFAERYVDKLQANQRSRYALLMRAFTMSAAETARRTREFRSPPQEQINMLLHFKDDC
Predicted secondary structure













SS confidence





































































Known secondary structure (DSSP) T
S

TTS
T





 .........1690.........1700.........1710.........1720.........1730.........1740.........1750
Sequence PLPEDIRQDLQDFHQDLLAHCGIQPQSLQELVSHMVVRWAQEDYVQSPELVRAMFSLLHRQYDGLGELLR
Predicted secondary structure










SS confidence





































































Known secondary structure (DSSP) S

T



SS




 .........1760.........1770.........1780.........1790.........1800.........1810.........1820
Sequence ALPRAYTISPSSVEDTMSLLECLGQIRSLLIVQMGPQEENLMIQSIGNIMNNKVFYQHPNLMRALGMHET
Predicted secondary structure















SS confidence





































































Known secondary structure (DSSP) GGG

GGGTB


T
S
T
 .........1830.........1840.........1850.........1860.........1870.........1880.........1890
Sequence VMEVMVNVLGEIRFPKMVTSCCRFLCYFCRISRQNQRSMFDHLSYLLENSGIGLGMQGSTPLDVAAASVI
Predicted secondary structure
















SS confidence





































































Known secondary structure (DSSP)




TT
TTT
SSSS
T
 .........1900.........1910.........1920.........1930.........1940.........1950.........1960
Sequence DNNELALALQEQDLEKVVSYLAGCGLQSCPMLLAKGYPDIGWNPCGGERYLDFLRFAVFVNGESVEENAN
Predicted secondary structure




























SS confidence





































































Known secondary structure (DSSP) T


S

T



SS
TT
 .........1970.........1980.........1990.........2000.........2010.........2020.........2030
Sequence VVVRLLIRKPECFGPALRGEGGSGLLAAIEEAIRISEDPARDNRVHLGHAIMSFYAALIDLLGRCAPEMH
Predicted secondary structure


























SS confidence





































































Known secondary structure (DSSP)
GGGT
TTTSTTT



TTT




TS

 .........2040.........2050.........2060.........2070.........2080.........2090.........2100
Sequence LIQAGKGEALRIRAILRSLVPLDDLVGIISLPLQIPVQPKMSASFVPDHKASMVLFLDRVYGIENQDFLL
Predicted secondary structure


























SS confidence





































































Known secondary structure (DSSP) T
S
S








TTTS

TT



 .........2110.........2120.........2130.........2140.........2150.........2160.........2170
Sequence HVLDVGFLPDMRAAASLDTATFSTTEMALALNRYLCLAVLPLITKCAPLFAGTEHRAIMVDSMLHTVYRL
Predicted secondary structure

















SS confidence





































































Known secondary structure (DSSP) TTSGGGSS
TTS

GGG
 .........2180.........2190.........2200.........2210.........2220.........2230.........2240
Sequence SRGRSLTKAQRDVIEDCLMALCRYIRPSMLQHLLRRLVFDVPILNEFAKMPLKLLTNHYERCWKYYCLPT
Predicted secondary structure














SS confidence





































































Known secondary structure (DSSP) T
SS

TS
TTTT

SS
SSS
 .........2250.........2260.........2270.........2280.........2290.........2300.........2310
Sequence GWANFGVTSEEELHLTRKLFWGIFDSLAHKKYDQELYRMAMPCLCAIAPEKLDSFINKFAEYTHEKWAFD
Predicted secondary structure
















SS confidence





































































Known secondary structure (DSSP)

SSS



SSS


T


 .........2320.........2330.........2340.........2350.........2360.........2370.........2380
Sequence KIQNNWSYGENVDEELKTHPMLRPYKTFSEKDKEIYRWPIKESLKAMIAWEWTIEKAREGEEERTEKKKT
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SS confidence





































































Known secondary structure (DSSP) T

SS
BTTTTSS


TTTS
TT




S








 .........2390.........2400.........2410.........2420.........2430.........2440.........2450
Sequence RKISQTAQTYDPREGYNPQPPDLSGVTLSRELQAMAEQLAENYHNTWGRKKKQELEAKGGGTHPLLVPYD
Predicted secondary structure






























SS confidence





































































Known secondary structure (DSSP)



SS




SS








TTTS


T



TT


TT
 .........2460.........2470.........2480.........2490.........2500.........2510.........2520
Sequence TLTAKEKARDREKAQELLKFLQMNGYAVTRIEKRFAFGFLQQLLRWMDISQEFIAHLEAHEQEIKFFAKI
Predicted secondary structure







SS confidence





































































Known secondary structure (DSSP) TS
T




T
 .........2530.........2540.........2550.........2560.........2570.........2580.........2590
Sequence LLPLINQYFTNHCLYFLSNKEKEMITSLFCKLAALVRHVVNCLHILARKAGLRSFFESASEDIEKMVENL
Predicted secondary structure

SS confidence





































































Known secondary structure (DSSP) T




T

 .........2600.........2610.........2620.........2630.........2640.........2650.........2660
Sequence RQNLTYTTVALLPVLTTLFQHIAQHDVQVSCYRTLCSIYSLRPALGECLARLAARLMADIGGLAPHVIEI
Predicted secondary structure









SS confidence





































































Known secondary structure (DSSP)







T

 .........2670.........2680.........2690.........2700.........2710.........2720.........2730
Sequence TLPMLCSYLPRWSDHLNSLLGNILRIIVNNRLAVFAQPIVSRARPELLHSHFIPTIGRLRKRAGKVVAEE
Predicted secondary structure










SS confidence





































































Known secondary structure (DSSP)



S





SS
S
 .........2740.........2750.........2760.........2770.........2780.........2790.........2800
Sequence EQLRDEFSVLCRDLYALYPLLIRYVDNNRAHWLTEPNANAEELFRMVGEIFIYWSKSHNFKREEQNFVVQ
Predicted secondary structure








SS confidence





































































Known secondary structure (DSSP)

SSSS
 .........2810.........2820.........2830.........2840.........2850.........2860.........2870
Sequence NEIVATLKKMLPIGLNMCDQDLIMLAKTRYALKDTDEEVREFLQNDPEKIVRRVQEVSAVLYHLEQTEHS
Predicted secondary structure












SS confidence





































































Known secondary structure (DSSP)


TTT

TT

S






 .........2880.........2890.........2900.........2910.........2920.........2930.........2940
Sequence KQRRRAVVACFRMTPLYNLPTHRACNMFLESYKAAWILTEDHSFEDRMIDDLSKAGKKPDPLHQLVLHFS
Predicted secondary structure















SS confidence





































































Known secondary structure (DSSP)
TTTT


GGGS
TTT




T






 .........2950.........2960.........2970.........2980.........2990.........3000.........3010
Sequence RTALTEKSKLDEDYLYMAYADIMAKSCHLEEVSFEEKEMEKQRLLYQQSRLHTRGAAEMVLQMISACKGE
Predicted secondary structure



























SS confidence





































































Known secondary structure (DSSP) S

SS








TTTTTT
 .........3020.........3030.........3040.........3050.........3060.........3070.........3080
Sequence TGAMVSSTLKLGISILNGGNAEVQQKMLDYLKDKKEVGFFQSIQALMQTCSVLDLNAFERQNKAEGLGMV
Predicted secondary structure








SS confidence





































































Known secondary structure (DSSP)
STT



S




S
S
 .........3090.........3100.........3110.........3120.........3130.........3140.........3150
Sequence NEDGTVINRQNGEKVMADDEFTQDLFRFLQLLCEGHNNDFQNYLRTQTGNTTTINIIICTVDYLLRLQES
Predicted secondary structure



















SS confidence





































































Known secondary structure (DSSP) TT

TTTT

STTTTSTTT


SSSSS


 .........3160.........3170.........3180.........3190.........3200.........3210.........3220
Sequence ISDFYWYYSGKDVIEEQGKRNFSKAMSVAKQVFNSLTEYIQGPCTGNQQSLAHSRLWDAVVGFLHVFAHM
Predicted secondary structure























SS confidence





































































Known secondary structure (DSSP) TT
SS

TTT
SST
 .........3230.........3240.........3250.........3260.........3270.........3280.........3290
Sequence MMKLAQDSSQIELLKELLDLQKDMVVMLLSLLEGNVVNGMIARQMVDMLVESSSNVEMILKFFDMFLKLK
Predicted secondary structure






SS confidence





































































Known secondary structure (DSSP) S
TT
TTT

TT
T
 .........3300.........3310.........3320.........3330.........3340.........3350.........3360
Sequence DIVGSEAFQDYVTDPRGLISKKDFQKAMDSQKQFTGPEIQFLLSCSEADENEMINFEEFANRFQEPARDI
Predicted secondary structure



















SS confidence





































































Known secondary structure (DSSP) S


TT





S
S


SSS


 .........3370.........3380.........3390.........3400.........3410.........3420.........3430
Sequence GFNVAVLLTNLSEHVPHDPRLRNFLELAESILEYFRPYLGRIEIMGASRRIERIYFEISETNRAQWEMPQ
Predicted secondary structure













SS confidence





































































Known secondary structure (DSSP)



TTSTTT

GGG



TS
 .........3440.........3450.........3460.........3470.........3480.........3490.........3500
Sequence VKESKRQFIFDVVNEGGEAEKMELFVSFCEDTIFEMQIAAQISETAREAATALAALLWAVVARWGELEVQ
Predicted secondary structure



SS confidence





































































Known secondary structure (DSSP)







 .........3510.........3520.........3530.........3540.........3550.........3560.........3570
Sequence RVKFLNYLSRNFYTLRFLALFLAFAINFILLFYKVSDSPPNMVYYFLEESTGYMEPALWCLSLLHTLVAF
Predicted secondary structure






SS confidence





































































Known secondary structure (DSSP) TTTSS



S

GGG
 .........3580.........3590.........3600.........3610.........3620.........3630.........3640
Sequence LCIIGYNCLKVPLVIFKREKELARKLEFDGLYITEQPGDDDVKGQWDRLVLNTPSFPSNYWDKFVKRKVL
Predicted secondary structure











SS confidence





































































Known secondary structure (DSSP) TT
TTTTS


TT
SS
TTSSSS
TT
 .........3650.........3660.........3670.........3680.........3690.........3700.........3710
Sequence DKHGDIFGRERIAELLGMDLASLEITAHNERTWLMSIDVKYQIWKFGVIFTDNSFLYLGWYMVMSLLGHY
Predicted secondary structure





SS confidence





































































Known secondary structure (DSSP)




T

GGGG


 .........3720.........3730.........3740.........3750.........3760.........3770.........3780
Sequence NNFFFAAHLLDIAMGVKTLRTILSSVTHNGKQLVMTVGLLAVVVYLYTVVAFNFFRKFYNKSEDEDEPDM
Predicted secondary structure














SS confidence





































































Known secondary structure (DSSP)
GGGGGGGGGGGTTTST
TTT
B



SSS

B
 .........3790.........3800.........3810.........3820.........3830.........3840.........3850
Sequence KCDDMMTCYLFHMYVGVRAGGGIGDEIEDPAGDEYELYRVVFDITFFFFVIVILLAIIQGLIIDAFGELR
Predicted secondary structure
















SS confidence





































































Known secondary structure (DSSP) S
SSSS
GGGGS


TT
TTTTT
 .........3860.........3870.........3880.........3890.........3900.........3910.........3920
Sequence DQQEQVKEDMETKCFICGIGSDYFDTTPHGFETHTLEEHNLANYMFFLMYLINKDETEHTGQESYVWKMY
Predicted secondary structure



















SS confidence





































































Known secondary structure (DSSP) SBTTTB

SSSTTTSTTTTS
S
STT

 .........3930.........3940..
Sequence QERCWDFFPAGDCFRKQYEDQL
Predicted secondary structure









SS confidence





















Known secondary structure (DSSP) T


SS
TT


TTT


Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


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Accessibility Statement
Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
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Michael Sternberg 
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