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 Protein Homology/analogY Recognition Engine V 2.0


 

Fold library entry viewer: c8du1B_

Fold library idPDB HeaderMoleculeTitle
c8du1B_1.85PDB header: lyaseChain: B: PDB Molecule: dtdp-glucose 4,6-dehydratase;


Added to library: Sat Aug 13 10:36:05 2022
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence HMKNIIITGGAGFIGSHVVREFVIKNPEITIINLDALTYAGNLENLKDIENFPNYVFEKADITKPEELRK
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Known secondary structure (DSSP)


TTTS
TTS


TT

GGGGTTTTT
TT

TT
 .........80.........90.........100.........110.........120.........130.........140
Sequence VFEKYNPDAVVHLAAESHVDRSITDPNAFINTNVIGTANLLNLCREFWTLNPEHTHGRFPNEPRTNLFYH
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Known secondary structure (DSSP)

S





TTS
TT
TTTS


GGGTTT


SS

S
 .........150.........160.........170.........180.........190.........200.........210
Sequence VSTDEVYGSLGETGFFLETTAYDPQSPYSASKAASDHLVRAYGNTYGMPFIVSNCSNNYGPNHFPEKLIP
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Known secondary structure (DSSP) GGGG

B
SS

B
TTS




S



STT

TTS
 .........220.........230.........240.........250.........260.........270.........280
Sequence LCISNILNEKPLPIYGDGKYTRDWLYVIDHARAIHQIFNEAKTGETYNIGGFNEWQNIDLVKELIKQLDA
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Known secondary structure (DSSP) TT

TTS


S
TT


S

 .........290.........300.........310.........320.........330.........340.........350
Sequence KLGKPEGHSEKLITFVKDRPGHDKRYAIDATKLNKDLGWKPSVTFEEGLAKTIDWYLDNKEWLENVTSGD
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Known secondary structure (DSSP) T

TTGGGGG


GGGS

B





SS

SG
 .........
Sequence YQKYYENQY
Predicted secondary structure

SS confidence








Known secondary structure (DSSP) GGG


Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


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Accessibility Statement
Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
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Michael Sternberg 
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