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 Protein Homology/analogY Recognition Engine V 2.0


 

Fold library entry viewer: c8dr5A_

Fold library idPDB HeaderMoleculeTitle
c8dr5A_2.76PDB header: replication/dnaChain: A: PDB Molecule: replication factor c subunit 1;


Added to library: Sat Aug 20 09:06:21 2022
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence NITAQDVLDKIPSLDLSFPEGKPNCLLGLTIVFTGVLPTLERGASEALAKRYGARVTKSISSKTSVVVLG
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Known secondary structure (DSSP)


S










TTSSTT
SB
SSS
TT

SS

TT


 .........80.........90.........100.........110.........120.........130.........140
Sequence DEAGPKKLEKIKQLKIKAIDEEGFKQLIAGMPAEGGDGEAAEKARRKLEEQHNIATKEAELLVKKEEERS
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Known secondary structure (DSSP) BS

T

S
TTS


S
 .........150.........160.........170.........180.........190.........200.........210
Sequence KKLAATRVSVVREEDKLWTVKYAPTNLQQVCGNKGSVMKLKNWLANWENSKKNSFKHAGKDGSGVFRAAM
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Known secondary structure (DSSP)



GGGS
T

SSTTS

S
TTTT
S

SSSTTS
S
 .........220.........230.........240.........250.........260.........270.........280
Sequence LYGPPGIGKTTAAHLVAQELGYDILEQNASDVRSKTLLNAGVKNALDNMSVVGYFKHNEEAQNLNGKHFV
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Known secondary structure (DSSP)
SSSSSTT

TTS


TTTTT


SSS
SS
GGGGS
 .........290.........300.........310.........320.........330.........340.........350
Sequence IIMDEVDGMSGGDRGGVGQLAQFCRKTSTPLILICNERNLPKMRPFDRVCLDIQFRRPDANSIKSRLMTI
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Known secondary structure (DSSP)

GGG

TTSTTS
SS
S


SGGGGGGTTSS




TTTS
 .........360.........370.........380.........390.........400.........410.........420
Sequence AIREKFKLDPNVIDRLIQTTRGDIRQVINLLSTISTTTKTINHENINEISKAWEKNIALKPFDIAHKMLD
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Known secondary structure (DSSP) T

GGGTTS
TTT


TTTT






TB
 .........430.........440.........450.........460.........470.........480.........490
Sequence GQIYSDIGSRNFTLNDKIALYFDDFDFTPLMIQENYLSTRPSVLKPGQSHLEAVAEAANCISLGDIVEKK
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Known secondary structure (DSSP) SS
TTTTSSSS


TT

 .........500.........510.........520.........530.........540.........550.........560
Sequence IRSSEQLWSLLPLHAVLSSVYPASKVAGHMAGRINFTAWLGQNSKSAKYYRLLQEIHYHTRLGTSTDKIG
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Known secondary structure (DSSP) SSSS

GGGT
SS




SSGGG

S
 .........570.........580.........590.........600.........610.........620.........630
Sequence LRLDYLPTFRKRLLDPFLKQGADAISSVIEVMDDYYLTKEDWDSIMEFFVGPDVTTAIIKKIPATVKSGF
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Known secondary structure (DSSP) TTSGGGTT

TT

GGG

S
 .........640......
Sequence TRKYNSMTHPVAIYRT
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Known secondary structure (DSSP) TS



SSS


Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


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Accessibility Statement
Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
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