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 Protein Homology/analogY Recognition Engine V 2.0


 

Fold library entry viewer: c8dmfA_

Fold library idPDB HeaderMoleculeTitle
c8dmfA_4.00PDB header: translationChain: A: PDB Molecule: tetracycline resistance protein tetq;


Added to library: Sat Jan 7 08:21:01 2023
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence MKVYQTNEIKNIALLGSSGSGKTTLVEAMLFESGVIKRRGSVAAKNTVSDYFPVEQEYGYSVFSTVLHVE
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Known secondary structure (DSSP)




GGG

TTSSTSSSS


TTTT

SS

STTS

S
 .........80.........90.........100.........110.........120.........130.........140
Sequence WNNKKLNIIDCPGSDDFVGSTVTALNVTDTAIILLNGQYGVEVGTQNHFRYTEKLNKPVIFLVNQLDNEK
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Known secondary structure (DSSP)
SS



STT

STTTBS
T



SSSS
 .........150.........160.........170.........180.........190.........200.........210
Sequence CDYDNILEQLKEAYGSKVVPIQYPIATGPGFNALIDVLLMKKYSWKPEGGAPVIEDIPAEEMDKAMEMHK
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Known secondary structure (DSSP)

S
TT




GGG

TTTT

SS



B




GGG
 .........220.........230.........240.........250.........260.........270.........280
Sequence ALVEAAAENDEGLMEKFFEQDSLTEDEMREGIRKGLIARGMFPVFCVCGGKDMGVRRLMEFLGNVVPFVS
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Known secondary structure (DSSP)




TTTTTT


TTTT



BTTTTBTSS

SS
 .........290.........300.........310.........320.........330.........340.........350
Sequence EMPKVENTDGKEVAPDVNGPESLYFFKTSVEPHIGEVSYFKVMSGKVREGDDLLNADRGSKERIAQIYVV
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Known secondary structure (DSSP) SS


B
TT

B



TTS








TTT


STT
SSS





 .........360.........370.........380.........390.........400.........410.........420
Sequence AGGNRVKVEELQAGDIGAAVKLKDVKTGNTLNGKDCDYKFNFIKYPNSKYSRAIKPVNEADVEKMMTILN
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Known secondary structure (DSSP) SSSSSSS

S
SS

TT

SS













SSTT
 .........430.........440.........450.........460.........470.........480.........490
Sequence RMREEDPTWVIEQSKELKQTLVHGQGEFHLRTLKWRLENNEKLQVKFEEPKIPYRETITKAARADYRHKK
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Known secondary structure (DSSP)
TTSTTTTSSTTS









S


 .........500.........510.........520.........530.........540.........550.........560
Sequence QSGGAGQFGEVHLIVEPYKEGMPVPDTYKFNGQEFKITVRGTEEIPLEWGGKLVFINSIVGGSIDARFLP
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Known secondary structure (DSSP)
SSSS

B

SS



SB

BTTB

B







TTS





SSSSS
GGG
 .........570.........580.........590.........600.........610.........620.........630
Sequence AIMKGIMSRLEQGPLTGSYARDVRVIVYDGKMHPVDSNEISFMLAGRNAFSEAFKNAGPKILEPIYDVEV
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Known secondary structure (DSSP) TS
SSSSS
S


TTTB
S
B
 .........640.........650.........660.........670.........680.........690.........700
Sequence FVPSDRMGDVMGDLQGRRAMIMGMSSEKGFEKLVAKVPLKEMSSYSTALSSLTGGRASFIMKFASYELVP
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Known secondary structure (DSSP) GGGTTT



TTGGG
TTTT

B




B


 .........710........
Sequence TDVQDKLIKDFEAKQTEE
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Known secondary structure (DSSP) TT


Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


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Accessibility Statement
Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
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