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 Protein Homology/analogY Recognition Engine V 2.0


 

Fold library entry viewer: c8dmbP_

Fold library idPDB HeaderMoleculeTitle
c8dmbP_3.10PDB header: rna binding protein/rna/dnaChain: P: PDB Molecule: ubiquitin-like protein smt3,isrb protein,monomeric


Added to library: Sat Oct 22 12:12:08 2022
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence TRVPVVGVDGRPLMPTTPRKARLLIRDGLAVPRRNKLGLFYIQMLRPVGTRTQPVALAVDPGAKYDGVAV
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Known secondary structure (DSSP)

B

TTS
B


B
TTS
TT

SS









SS
 .........80.........90.........100.........110.........120.........130.........140
Sequence ASHRRVELRAMVFLPDDVPRKMETRRNLRRARRYRKTPRRPARFDNRRRKGYWLAPTQRFKVEARLKVVR
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Known secondary structure (DSSP) SSB



S






S




S



 .........150.........160.........170.........180.........190.........200.........210
Sequence ELCRIYPVQLIVTEDVRFNHARDRNGKYFSTVEIGKTLTYREYRKLAELRLVEVSETDAWRERFGTHAND
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Known secondary structure (DSSP) S







GGG
TT
TTS


T
 .........220.........230.........240.........250.........260.........270.........280
Sequence AAAMLMGVTGCAHNPAAPFFVWRRLRYARRSLFRQNPQKDGVRPRFGGTANGGFFRKGDWVEAEKAGKVY
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Known secondary structure (DSSP)

B

TTS





S

B
SS

GGG


B


S

SSS

TT
TT
 .........290.........300.........310.........320........
Sequence RGWVCGLPTETTKLVGVADADGKRIGQFSPKKVRLLARSTGFSWKEVA
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SS confidence















































Known secondary structure (DSSP)


SS



TTS

TTS


S


Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


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Accessibility Statement
Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
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Michael Sternberg 
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