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 Protein Homology/analogY Recognition Engine V 2.0


 

Fold library entry viewer: c8djkB_

Fold library idPDB HeaderMoleculeTitle
c8djkB_3.33PDB header: oxidoreductase/immune systemChain: B: PDB Molecule: ubia prenyltransferase domain-containing protein 1;


Added to library: Sat Aug 6 08:45:30 2022
 
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 1........10.........20.........30.........40.........50.........60.........70
Sequence SWRQKCASYVLALRPWSFSASLTPVALGSALAYRSQGVLDPRLLVGCAVAVLAVHGAGNLVSTYYDFSKG
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Known secondary structure (DSSP)
GGG

TTS


GGGGTTT
 .........80.........90.........100.........110.........120.........130.........140
Sequence IDVDRILEPQDVVRFGVFLYTLGCVCAACLYYLSTLKLEHLALIYFGGLSGSFLYTGGIGFKYVALGDLI
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Known secondary structure (DSSP)



S


TTS


TTT
SSSS
STT
 .........150.........160.........170.........180.........190.........200.........210
Sequence ILITFGPLAVMFAYAVQVGSLAIFPLVYAIPLALSTEAILHSNNTRDMESDQEAGIVTLAILIGPTFSYV
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Known secondary structure (DSSP) SS

STTT



 .........220.........230.........240.........250.........260.........270.........280
Sequence LYNTLLFLPYLIFSILATHCSISLALPLLTIPMAFSLERQFPQRTAKLNLLLGLFYVFGIILAPAGSLPR
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Known secondary structure (DSSP) T
GGGGGGGGGT

S
TT
STT
 .
Sequence L
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)


Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


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Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
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Michael Sternberg 
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