PHYRE Protein Fold Recognition Server

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Protein Homology/analogY Recognition Engine V 2.0

Fold library entry viewer: c8dgjA_

Fold library id	PDB Header	Molecule	Title
c8dgjA_	4.02	PDB header: rna binding protein/rna	Chain: A: PDB Molecule: endoribonuclease dcr-1;

Links to external resources
Added to library: Sat Nov 19 16:24:32 2022

1 . . . . . . . . 10 . . . . . . . . . 20 . . . . . . . . . 30 . . . . . . . . . 40 . . . . . . . . . 50 . . . . . . . . . 60 . . . . . . . . . 70

Sequence T V F T P R D F Q V E L L A T A Y E R N T I I C L G H R S S K E F I A L K L L Q E L S R R A R R H G R V S V Y L S C E V G T S T E P C S I Y

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)
T T T S
S
T T
S S
S S
S S

. . . . . . . . . 80 . . . . . . . . . 90 . . . . . . . . . 100 . . . . . . . . . 110 . . . . . . . . . 120 . . . . . . . . . 130 . . . . . . . . . 140

Sequence T M L T H L T D L R V W Q E Q P D M Q I P F D H C W T D Y H V S I L R P E G F L Y L L E T R E L L L S R V E L I V L E D C H D S A V Y Q R I

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) S S S S
T T S
S S T T T S
S
T T S S
G G G T T T T S

. . . . . . . . . 150 . . . . . . . . . 160 . . . . . . . . . 170 . . . . . . . . . 180 . . . . . . . . . 190 . . . . . . . . . 200 . . . . . . . . . 210

Sequence R P L F E N H I M P A P P A D R P R I L G L A G P L H S A G C E L Q Q L S A M L A T L E Q S V L C Q I E S A S D I V T V L R Y C S R P H E Y

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) T T T T S
T T S
S
G G G
S S
S S S
S S S

. . . . . . . . . 220 . . . . . . . . . 230 . . . . . . . . . 240 . . . . . . . . . 250 . . . . . . . . . 260 . . . . . . . . . 270 . . . . . . . . . 280

Sequence I V Q C A P F E M D E L S L V L A D V L N T H K S F L L D H R Y D P Y E I Y G T D Q F M D E L K D I P D P K V D P L N V I N S L L V V L H E

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)
T
S T T T T
T T
S
S S

. . . . . . . . . 290 . . . . . . . . . 300 . . . . . . . . . 310 . . . . . . . . . 320 . . . . . . . . . 330 . . . . . . . . . 340 . . . . . . . . . 350

Sequence M G P W C T Q R A A H H F Y Q C N E K L K V K T P H E R H Y L L Y C L V S T A L I Q L Y S L C E H A F H R H L G S G S D S R Q T I E R Y S S

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) T
S S S S
T T
T S

. . . . . . . . . 360 . . . . . . . . . 370 . . . . . . . . . 380 . . . . . . . . . 390 . . . . . . . . . 400 . . . . . . . . . 410 . . . . . . . . . 420

Sequence P K V R R L L Q T L R C F K T L C A L I Y C N Q N H T A R V L F E L L A E I S R R D P D L K F L R C Q Y T T D R V A D P T T E P K E A E L E

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) T
S S T T
S T T
S
S
T T T

. . . . . . . . . 430 . . . . . . . . . 440 . . . . . . . . . 450 . . . . . . . . . 460 . . . . . . . . . 470 . . . . . . . . . 480 . . . . . . . . . 490

Sequence H R R Q E E V L K R F R M H D C N V L I G T S V L E E G I D V P K C N L V V R W D P P T T Y R S Y V Q C K G R A R A A P A Y H V I L V A S T

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) T T S S
G G G S S S S
S S S
S S
S S S

. . . . . . . . . 500 . . . . . . . . . 510 . . . . . . . . . 520 . . . . . . . . . 530 . . . . . . . . . 540 . . . . . . . . . 550 . . . . . . . . . 560

Sequence T K D L V H Q M A Q Y R E I E Q M L L S K C A N T E P P E Q E Q C E A E R F S A C L A A Y R P K P H L L T G A S V D L G S A I A L V N K Y C

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) G G G
S S
G G G T B
B
S S S S
T T S
B
S T T

. . . . . . . . . 570 . . . . . . . . . 580 . . . . . . . . . 590 . . . . . . . . . 600 . . . . . . . . . 610 . . . . . . . . . 620 . . . . . . . . . 630

Sequence A R L P S D T F T K L T A L W R C T R N E R A G V T L F Q Y T L R L P I N S P L K H D I V G L P M P T Q T L A R R L A A L Q A C V E L H R I

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) S
S S
T T
T T S S
S
B S S

. . . . . . . . . 640 . . . . . . . . . 650 . . . . . . . . . 660 . . . . . . . . . 670 . . . . . . . . . 680 . . . . . . . . . 690 . . . . . . . . . 700

Sequence G E L D D Q L Q P I G K E G F R A L E P D W E C F E L E P E D E P R P G T T K G A P C Y L Y F I Q L T L Q C P I P E E Q N T R G R K I Y P P

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) T S B
T T
S B
S S S
G G G G G G G S
T T T
T T S
T T T
T T
S

. . . . . . . . . 710 . . . . . . . . . 720 . . . . . . . . . 730 . . . . . . . . . 740 . . . . . . . . . 750 . . . . . . . . . 760 . . . . . . . . . 770

Sequence E D A Q Q G F G I L T T K R I P K L S A F S I F T R S G E V K V S L E L A K E R V I L T S E Q I V C I N G F L N Y T F T N V L R L Q K F L M

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) S S S S S S
T T
S
T S
S S

. . . . . . . . . 780 . . . . . . . . . 790 . . . . . . . . . 800 . . . . . . . . . 810 . . . . . . . . . 820 . . . . . . . . . 830 . . . . . . . . . 840

Sequence L F D P D S T E N C V F I V P T V K A P A G G K H I D W Q F L E L I Q A N G N T M P R A V P D E E R Q A Q P F D P Q R F Q D A V V M P W Y R

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)
S
S S
T T S
T T T
S
T T T T S S
S S

. . . . . . . . . 850 . . . . . . . . . 860 . . . . . . . . . 870 . . . . . . . . . 880 . . . . . . . . . 890 . . . . . . . . . 900 . . . . . . . . . 910

Sequence N Q D Q P Q Y F Y V A E I C P H L S P L S C F P G D N Y R T F K H Y Y L V K Y G L T I Q N T S Q P L L D V D H T S A R L N F L T P R Y V N R

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)
S S
T T
T T S
S S S S
S S
S
S S
S
S
T T
S S S

. . . . . . . . . 920 . . . . . . . . . 930 . . . . . . . . . 940 . . . . . . . . . 950 . . . . . . . . . 960 . . . . . . . . . 970 . . . . . . . . . 980

Sequence K G V A L P T S S E E T K R A K R E N L E Q K Q I L V P E L C T V H P F P A S L W R T A V C L P C I L Y R I N G L L L A D D I R K Q V S A D

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) S S T T T T S G G G S S
S
T T T S S
T T S
T

. . . . . . . . . 990 . . . . . . . . . 1000 . . . . . . . . . 1010 . . . . . . . . . 1020 . . . . . . . . . 1030 . . . . . . . . . 1040 . . . . . . . . . 1050

Sequence L G L G R Q Q T A Q E V E K R Q K Q L S I I Q A T N A N E R Q Y Q Q T K N L L I G F N F K H E D Q K E P A T I R Y E E S I A K L K T E I E S

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) T S S S
S T T T T
T T

. . . . . . . . . 1060 . . . . . . . . . 1070 . . . . . . . . . 1080 . . . . . . . . . 1090 . . . . . . . . . 1100 . . . . . . . . . 1110 . . . . . . . . . 1120

Sequence G G M L V P H D S M M E L L K Q L L P Y V N E D V L A K K L G D R R E L L L S D L V E L N A D W V A R H E Q E T Y N V M G C G D S F D N Y N

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) S S
T T S
T T
S S B
T T
B S S S
T T S G G G

. . . . . . . . . 1130 . . . . . . . . . 1140 . . . . . . . . . 1150 . . . . . . . . . 1160 . . . . . . . . . 1170 . . . . . . . . . 1180 . . . . . . . . . 1190

Sequence D H H R L N L D E K Q L L P A G F S F D R Q P D L V G H P G P S P S I I L Q A L T M S N A N D G I N L E R L E T I G D S F L K Y A I T T Y L

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) T
S S
S
S
S T T
S
S S S
T B
T T T
S S
T

. . . . . . . . . 1200 . . . . . . . . . 1210 . . . . . . . . . 1220 . . . . . . . . . 1230 . . . . . . . . . 1240 . . . . . . . . . 1250 . . . . . . . . . 1260

Sequence Y I T Y E N V H E G K L S H L R S K Q V A N L N L Y R L G R R K R L G E Y M I A T K F E P H D N W L P P Q H S I P D K S I A D C V E A L I G

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) S S T T S
S
T
T T T S B
T T T S

. . . . . . . . . 1270 . . . . . . . . . 1280 . . . . . . . . . 1290 . . . . . . . . . 1300 . . . . . . . . . 1310 . . . . . . . . . 1320 . . . . . . . . . 1330

Sequence A Y L I E C G P R G A L L F M A W L G V R V L P I T R Q L D G G N Q E Q R I P G S T K P N A E N V V T V Y G A W P T P R S P L L H F A P N A

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) T T T T T T T T
S
S S S
T T
T T
S S T T

. . . . . . . . . 1340 . . . . . . . . . 1350 . . . . . . . . . 1360 . . . . . . . . . 1370 . . . . . . . . . 1380 . . . . . . . . . 1390 . . . . . . . . . 1400

Sequence T E E L D Q L L S G F E E F E E S L G Y K F R D R S Y L L Q A M T H A S Y T P N R L T D C Y Q R L E F L G D A V L D Y L I T R H L Y E D P R

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) T T T T T
S S T T
T T
S
S S
S T T T
T T

. . . . . . . . . 1410 . . . . . . . . . 1420 . . . . . . . . . 1430 . . . . . . . . . 1440 . . . . . . . . . 1450 . . . . . . . . . 1460 . . . . . . . . . 1470

Sequence Q H S P G A L T D L R S A L V N N T I F A S L A V R H G F H K F F R H L S P G L N D V I D R F V R I Q Q E N G H C I S E E Y Y L L S E E E E

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)
T T S G G G
T T T S
S T T

. . . . . . . . . 1480 . . . . . . . . . 1490 . . . . . . . . . 1500 . . . . . . . . . 1510 . . . . . . . . . 1520 . . . . . . . . . 1530 . . . . . . . . . 1540

Sequence V P K A L G D V F E S I A G A I F L D S N M S L D V V W H V Y S N M M S P E I E Q F S N S V P K S P I R E L L E L E P E T A K F G K P E K L

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)
S T T T S
T
T S S
S S S

. . . . . . . . . 1550 . . . . . . . . . 1560 . . . . . . . . . 1570 . . . . . . . . . 1580 .

Sequence A D G R R V R V T V D V F C K G T F R G I G R N Y R I A K C T A A K C A L R Q L K

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) S S S S
T T T S S S

Download: PDB structure FASTA sequence
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Please cite: The Phyre2 web portal for protein modeling, prediction and analysis

Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]

© Structural Bioinformatics Group, Imperial College, London

Michael Sternberg

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	1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70
Sequence	T	V	F	T	P	R	D	F	Q	V	E	L	L	A	T	A	Y	E	R	N	T	I	I	C	L	G	H	R	S	S	K	E	F	I	A	L	K	L	L	Q	E	L	S	R	R	A	R	R	H	G	R	V	S	V	Y	L	S	C	E	V	G	T	S	T	E	P	C	S	I	Y
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)								T	T	T									S							S																							T	T								S	S		S	S		S	S
	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140
Sequence	T	M	L	T	H	L	T	D	L	R	V	W	Q	E	Q	P	D	M	Q	I	P	F	D	H	C	W	T	D	Y	H	V	S	I	L	R	P	E	G	F	L	Y	L	L	E	T	R	E	L	L	L	S	R	V	E	L	I	V	L	E	D	C	H	D	S	A	V	Y	Q	R	I
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)					S	S	S	S								T	T	S					S	S	T	T	T	S		S															T	T	S	S		G	G	G							T	T	T	T	S
	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210
Sequence	R	P	L	F	E	N	H	I	M	P	A	P	P	A	D	R	P	R	I	L	G	L	A	G	P	L	H	S	A	G	C	E	L	Q	Q	L	S	A	M	L	A	T	L	E	Q	S	V	L	C	Q	I	E	S	A	S	D	I	V	T	V	L	R	Y	C	S	R	P	H	E	Y
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)							T	T	T	T	S		T	T	S									S		G	G	G		S	S																S	S	S						S								S	S
	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280
Sequence	I	V	Q	C	A	P	F	E	M	D	E	L	S	L	V	L	A	D	V	L	N	T	H	K	S	F	L	L	D	H	R	Y	D	P	Y	E	I	Y	G	T	D	Q	F	M	D	E	L	K	D	I	P	D	P	K	V	D	P	L	N	V	I	N	S	L	L	V	V	L	H	E
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)																													T					S	T	T	T	T			T	T								S			S	S
	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350
Sequence	M	G	P	W	C	T	Q	R	A	A	H	H	F	Y	Q	C	N	E	K	L	K	V	K	T	P	H	E	R	H	Y	L	L	Y	C	L	V	S	T	A	L	I	Q	L	Y	S	L	C	E	H	A	F	H	R	H	L	G	S	G	S	D	S	R	Q	T	I	E	R	Y	S	S
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	T																									S	S																										S	S			T	T			T								S
	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420
Sequence	P	K	V	R	R	L	L	Q	T	L	R	C	F	K	T	L	C	A	L	I	Y	C	N	Q	N	H	T	A	R	V	L	F	E	L	L	A	E	I	S	R	R	D	P	D	L	K	F	L	R	C	Q	Y	T	T	D	R	V	A	D	P	T	T	E	P	K	E	A	E	L	E
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)												T											S	S																T	T		S	T	T		S								S					T	T	T
	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490
Sequence	H	R	R	Q	E	E	V	L	K	R	F	R	M	H	D	C	N	V	L	I	G	T	S	V	L	E	E	G	I	D	V	P	K	C	N	L	V	V	R	W	D	P	P	T	T	Y	R	S	Y	V	Q	C	K	G	R	A	R	A	A	P	A	Y	H	V	I	L	V	A	S	T
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)												T	T	S	S								G	G	G	S	S	S	S						S					S	S			S	S													S	S	S
	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.	.	.	.	.	.	530	.	.	.	.	.	.	.	.	.	540	.	.	.	.	.	.	.	.	.	550	.	.	.	.	.	.	.	.	.	560
Sequence	T	K	D	L	V	H	Q	M	A	Q	Y	R	E	I	E	Q	M	L	L	S	K	C	A	N	T	E	P	P	E	Q	E	Q	C	E	A	E	R	F	S	A	C	L	A	A	Y	R	P	K	P	H	L	L	T	G	A	S	V	D	L	G	S	A	I	A	L	V	N	K	Y	C
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)																			G	G	G		S	S														G	G	G	T	B			B		S	S	S	S		T	T	S			B		S	T	T
	.	.	.	.	.	.	.	.	.	570	.	.	.	.	.	.	.	.	.	580	.	.	.	.	.	.	.	.	.	590	.	.	.	.	.	.	.	.	.	600	.	.	.	.	.	.	.	.	.	610	.	.	.	.	.	.	.	.	.	620	.	.	.	.	.	.	.	.	.	630
Sequence	A	R	L	P	S	D	T	F	T	K	L	T	A	L	W	R	C	T	R	N	E	R	A	G	V	T	L	F	Q	Y	T	L	R	L	P	I	N	S	P	L	K	H	D	I	V	G	L	P	M	P	T	Q	T	L	A	R	R	L	A	A	L	Q	A	C	V	E	L	H	R	I
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)			S				S	S															T	T												T	T	S	S			S							B	S	S
	.	.	.	.	.	.	.	.	.	640	.	.	.	.	.	.	.	.	.	650	.	.	.	.	.	.	.	.	.	660	.	.	.	.	.	.	.	.	.	670	.	.	.	.	.	.	.	.	.	680	.	.	.	.	.	.	.	.	.	690	.	.	.	.	.	.	.	.	.	700
Sequence	G	E	L	D	D	Q	L	Q	P	I	G	K	E	G	F	R	A	L	E	P	D	W	E	C	F	E	L	E	P	E	D	E	P	R	P	G	T	T	K	G	A	P	C	Y	L	Y	F	I	Q	L	T	L	Q	C	P	I	P	E	E	Q	N	T	R	G	R	K	I	Y	P	P
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	T	S	B		T	T		S	B			S	S	S					G	G	G	G	G	G	G	S			T	T	T				T	T	S																					T	T	T		T	T							S
	.	.	.	.	.	.	.	.	.	710	.	.	.	.	.	.	.	.	.	720	.	.	.	.	.	.	.	.	.	730	.	.	.	.	.	.	.	.	.	740	.	.	.	.	.	.	.	.	.	750	.	.	.	.	.	.	.	.	.	760	.	.	.	.	.	.	.	.	.	770
Sequence	E	D	A	Q	Q	G	F	G	I	L	T	T	K	R	I	P	K	L	S	A	F	S	I	F	T	R	S	G	E	V	K	V	S	L	E	L	A	K	E	R	V	I	L	T	S	E	Q	I	V	C	I	N	G	F	L	N	Y	T	F	T	N	V	L	R	L	Q	K	F	L	M
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	S	S	S	S								S	S													T	T											S																								T	S					S	S
	.	.	.	.	.	.	.	.	.	780	.	.	.	.	.	.	.	.	.	790	.	.	.	.	.	.	.	.	.	800	.	.	.	.	.	.	.	.	.	810	.	.	.	.	.	.	.	.	.	820	.	.	.	.	.	.	.	.	.	830	.	.	.	.	.	.	.	.	.	840
Sequence	L	F	D	P	D	S	T	E	N	C	V	F	I	V	P	T	V	K	A	P	A	G	G	K	H	I	D	W	Q	F	L	E	L	I	Q	A	N	G	N	T	M	P	R	A	V	P	D	E	E	R	Q	A	Q	P	F	D	P	Q	R	F	Q	D	A	V	V	M	P	W	Y	R
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)				S			S	S												T	T	S															T	T	T													S					T	T	T	T	S	S							S	S
	.	.	.	.	.	.	.	.	.	850	.	.	.	.	.	.	.	.	.	860	.	.	.	.	.	.	.	.	.	870	.	.	.	.	.	.	.	.	.	880	.	.	.	.	.	.	.	.	.	890	.	.	.	.	.	.	.	.	.	900	.	.	.	.	.	.	.	.	.	910
Sequence	N	Q	D	Q	P	Q	Y	F	Y	V	A	E	I	C	P	H	L	S	P	L	S	C	F	P	G	D	N	Y	R	T	F	K	H	Y	Y	L	V	K	Y	G	L	T	I	Q	N	T	S	Q	P	L	L	D	V	D	H	T	S	A	R	L	N	F	L	T	P	R	Y	V	N	R
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)			S	S											T	T			T	T	S			S	S	S	S		S	S														S			S	S										S		S					T	T		S	S	S
	.	.	.	.	.	.	.	.	.	920	.	.	.	.	.	.	.	.	.	930	.	.	.	.	.	.	.	.	.	940	.	.	.	.	.	.	.	.	.	950	.	.	.	.	.	.	.	.	.	960	.	.	.	.	.	.	.	.	.	970	.	.	.	.	.	.	.	.	.	980
Sequence	K	G	V	A	L	P	T	S	S	E	E	T	K	R	A	K	R	E	N	L	E	Q	K	Q	I	L	V	P	E	L	C	T	V	H	P	F	P	A	S	L	W	R	T	A	V	C	L	P	C	I	L	Y	R	I	N	G	L	L	L	A	D	D	I	R	K	Q	V	S	A	D
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	S	S	T	T	T	T	S	G	G	G	S	S										S						T	T	T					S	S									T	T	S																							T
	.	.	.	.	.	.	.	.	.	990	.	.	.	.	.	.	.	.	.	1000	.	.	.	.	.	.	.	.	.	1010	.	.	.	.	.	.	.	.	.	1020	.	.	.	.	.	.	.	.	.	1030	.	.	.	.	.	.	.	.	.	1040	.	.	.	.	.	.	.	.	.	1050
Sequence	L	G	L	G	R	Q	Q	T	A	Q	E	V	E	K	R	Q	K	Q	L	S	I	I	Q	A	T	N	A	N	E	R	Q	Y	Q	Q	T	K	N	L	L	I	G	F	N	F	K	H	E	D	Q	K	E	P	A	T	I	R	Y	E	E	S	I	A	K	L	K	T	E	I	E	S
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	T	S	S	S																							S	T											T	T	T																												T	T
	.	.	.	.	.	.	.	.	.	1060	.	.	.	.	.	.	.	.	.	1070	.	.	.	.	.	.	.	.	.	1080	.	.	.	.	.	.	.	.	.	1090	.	.	.	.	.	.	.	.	.	1100	.	.	.	.	.	.	.	.	.	1110	.	.	.	.	.	.	.	.	.	1120
Sequence	G	G	M	L	V	P	H	D	S	M	M	E	L	L	K	Q	L	L	P	Y	V	N	E	D	V	L	A	K	K	L	G	D	R	R	E	L	L	L	S	D	L	V	E	L	N	A	D	W	V	A	R	H	E	Q	E	T	Y	N	V	M	G	C	G	D	S	F	D	N	Y	N
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	S	S																	T	T	S										T	T		S	S	B														T	T									B	S	S	S		T	T	S	G	G	G
	.	.	.	.	.	.	.	.	.	1130	.	.	.	.	.	.	.	.	.	1140	.	.	.	.	.	.	.	.	.	1150	.	.	.	.	.	.	.	.	.	1160	.	.	.	.	.	.	.	.	.	1170	.	.	.	.	.	.	.	.	.	1180	.	.	.	.	.	.	.	.	.	1190
Sequence	D	H	H	R	L	N	L	D	E	K	Q	L	L	P	A	G	F	S	F	D	R	Q	P	D	L	V	G	H	P	G	P	S	P	S	I	I	L	Q	A	L	T	M	S	N	A	N	D	G	I	N	L	E	R	L	E	T	I	G	D	S	F	L	K	Y	A	I	T	T	Y	L
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	T		S	S			S			S					S	T	T		S						S	S	S													T	B		T	T	T			S	S		T
	.	.	.	.	.	.	.	.	.	1200	.	.	.	.	.	.	.	.	.	1210	.	.	.	.	.	.	.	.	.	1220	.	.	.	.	.	.	.	.	.	1230	.	.	.	.	.	.	.	.	.	1240	.	.	.	.	.	.	.	.	.	1250	.	.	.	.	.	.	.	.	.	1260
Sequence	Y	I	T	Y	E	N	V	H	E	G	K	L	S	H	L	R	S	K	Q	V	A	N	L	N	L	Y	R	L	G	R	R	K	R	L	G	E	Y	M	I	A	T	K	F	E	P	H	D	N	W	L	P	P	Q	H	S	I	P	D	K	S	I	A	D	C	V	E	A	L	I	G
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)			S	S	T	T	S													S													T		T	T	T	S	B						T	T	T	S
	.	.	.	.	.	.	.	.	.	1270	.	.	.	.	.	.	.	.	.	1280	.	.	.	.	.	.	.	.	.	1290	.	.	.	.	.	.	.	.	.	1300	.	.	.	.	.	.	.	.	.	1310	.	.	.	.	.	.	.	.	.	1320	.	.	.	.	.	.	.	.	.	1330
Sequence	A	Y	L	I	E	C	G	P	R	G	A	L	L	F	M	A	W	L	G	V	R	V	L	P	I	T	R	Q	L	D	G	G	N	Q	E	Q	R	I	P	G	S	T	K	P	N	A	E	N	V	V	T	V	Y	G	A	W	P	T	P	R	S	P	L	L	H	F	A	P	N	A
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)		T	T	T	T	T	T	T											T				S											S	S	S			T	T						T	T																			S	S	T	T
	.	.	.	.	.	.	.	.	.	1340	.	.	.	.	.	.	.	.	.	1350	.	.	.	.	.	.	.	.	.	1360	.	.	.	.	.	.	.	.	.	1370	.	.	.	.	.	.	.	.	.	1380	.	.	.	.	.	.	.	.	.	1390	.	.	.	.	.	.	.	.	.	1400
Sequence	T	E	E	L	D	Q	L	L	S	G	F	E	E	F	E	E	S	L	G	Y	K	F	R	D	R	S	Y	L	L	Q	A	M	T	H	A	S	Y	T	P	N	R	L	T	D	C	Y	Q	R	L	E	F	L	G	D	A	V	L	D	Y	L	I	T	R	H	L	Y	E	D	P	R
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)							T	T	T	T									T				S	S	T							T			T	T			S			S	S			S	T	T																			T		T	T
	.	.	.	.	.	.	.	.	.	1410	.	.	.	.	.	.	.	.	.	1420	.	.	.	.	.	.	.	.	.	1430	.	.	.	.	.	.	.	.	.	1440	.	.	.	.	.	.	.	.	.	1450	.	.	.	.	.	.	.	.	.	1460	.	.	.	.	.	.	.	.	.	1470
Sequence	Q	H	S	P	G	A	L	T	D	L	R	S	A	L	V	N	N	T	I	F	A	S	L	A	V	R	H	G	F	H	K	F	F	R	H	L	S	P	G	L	N	D	V	I	D	R	F	V	R	I	Q	Q	E	N	G	H	C	I	S	E	E	Y	Y	L	L	S	E	E	E	E
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)																											T	T	S	G	G	G						T	T																T	S		S									T	T
	.	.	.	.	.	.	.	.	.	1480	.	.	.	.	.	.	.	.	.	1490	.	.	.	.	.	.	.	.	.	1500	.	.	.	.	.	.	.	.	.	1510	.	.	.	.	.	.	.	.	.	1520	.	.	.	.	.	.	.	.	.	1530	.	.	.	.	.	.	.	.	.	1540
Sequence	V	P	K	A	L	G	D	V	F	E	S	I	A	G	A	I	F	L	D	S	N	M	S	L	D	V	V	W	H	V	Y	S	N	M	M	S	P	E	I	E	Q	F	S	N	S	V	P	K	S	P	I	R	E	L	L	E	L	E	P	E	T	A	K	F	G	K	P	E	K	L
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)			S																T	T	T	S																							T					T						S	S		S	S	S
	.	.	.	.	.	.	.	.	.	1550	.	.	.	.	.	.	.	.	.	1560	.	.	.	.	.	.	.	.	.	1570	.	.	.	.	.	.	.	.	.	1580	.
Sequence	A	D	G	R	R	V	R	V	T	V	D	V	F	C	K	G	T	F	R	G	I	G	R	N	Y	R	I	A	K	C	T	A	A	K	C	A	L	R	Q	L	K
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	S	S	S	S									T	T	T								S	S															S