Standard Mode | Switch to Expert Mode | Login to view past jobsRetrieve Phyre Job Id
 
Subscribe to Phyre at Google Groups
Email:
Visit Phyre at Google Groups
 Protein Homology/analogY Recognition Engine V 2.0


 

Fold library entry viewer: c8dgcF_

Fold library idPDB HeaderMoleculeTitle
c8dgcF_3.40PDB header: antiviral proteinChain: F: PDB Molecule: terminase, large subunit;


Added to library: Sat Aug 6 08:37:13 2022
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence SQSQEAKNALIIAQLKGDFVAFLFVLWKALNLPKPTKCQIDMARTLANGDHKKFILQAFRGIGKSFITCA
Predicted secondary structure

















SS confidence





































































Known secondary structure (DSSP)

TT





TT
S
TTS
 .........80.........90.........100.........110.........120.........130.........140
Sequence FVVWVLWRDPQLKVLIVSASKERADANSIFIKNIIDLLPFLSELKPRPGQRDSVISFDVGLAKPDHSPSV
Predicted secondary structure

























SS confidence





































































Known secondary structure (DSSP)
TT

SSSSGGGGGS

SS



SS

TTS
S
SS
S
 .........150.........160.........170.........180.........190.........200.........210
Sequence KSVGITGQLTGSRADIIIADDVEVPGNSSTSSAREKLWTLVTEFAALLKPLPTSRVIYLGTPQTEMTLYK
Predicted secondary structure






























SS confidence





































































Known secondary structure (DSSP) TTS


S

BS



GGGSSSTTGGGGB

STT



SSS
 .........220.........230.........240.........250.........260.........270.........280
Sequence ELEDNKGYSTVIWPAQYPRNDAEALYYGDRLAPMLKAEYDEGFELLRGQPTDPVRFDMDDLRERELEYGK
Predicted secondary structure

































SS confidence





































































Known secondary structure (DSSP) TS


SBS
SSTT
SSSB
TTSTTTSTT
BS
TTT

S
 .........290.........300.........310.........320.........330.........340.........350
Sequence AGYTLQFMLNPNLSDAEKYPLRLRDAIVCAVDPERAPLSYQWLPNRQNRNEELPNVGLKGDDIHAFHTCS
Predicted secondary structure























































SS confidence





































































Known secondary structure (DSSP) TS





TTTS



GGGS


SS
S




TTTB

SS


S
TT


B

S
 .........360.........370.........380.........390.........400.........410.........420
Sequence SRTAEYQSKILVIDPSGRGKDETGYAVLYSLNGYIYLMEVGGFRGGYDDATLEKLAKKAKQWKVQTVVHE
Predicted secondary structure






























SS confidence





































































Known secondary structure (DSSP) S


S


SSS
TTSSS
TT
S
 .........430.........440.........450.........460.........470.........480.........490
Sequence SNFGDGMFGKIFSPILLKHHKCALEEIRAKGMKEMRICDTIEPLMGAHKLVIRDEVIREDYQTARDLDGK
Predicted secondary structure

























SS confidence





































































Known secondary structure (DSSP)

TT


TTT





S
TT

B
TTS
 .........500.........510.........520.........530........
Sequence HDVRYSAFYQMTRMTRERGAVAHDDRIDAIALGIEYLREGMLVDSRVG
Predicted secondary structure























SS confidence















































Known secondary structure (DSSP) B
GGG
T

SSTTS
S

TT







Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


Phyre is now FREE for commercial users!

All images and data generated by Phyre2 are free to use in any publication with acknowledgement

Accessibility Statement
Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
© Structural Bioinformatics Group, Imperial College, London
Michael Sternberg 
Disclaimer
Terms and Conditions
Structural Biology Group logo Imperial logo
BBSRC logo
Phyre2 is part of Genome3D