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 Protein Homology/analogY Recognition Engine V 2.0


 

Fold library entry viewer: c8dfsI_

Fold library idPDB HeaderMoleculeTitle
c8dfsI_3.00PDB header: rna binding protein/rnaChain: I: PDB Molecule: crispr-associated protein, ct1133 family;


Added to library: Sat Feb 25 08:55:35 2023
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence LQALHGYYQRMSADPDAGMPPYGTSMENISFALVLDAKGTLRGIEDLREQEGKKLRPRKMLVPIAEKKGN
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Known secondary structure (DSSP)
TSGGG



TT

TTS




SS







S
 .........80.........90.........100.........110.........120.........130.........140
Sequence GIKPNFLWENTSYILGVDAKGKQERTDKCHAAFIAHIKAADQDLAAVLQFLEHGSEEVIGSNIVFRIEGE
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Known secondary structure (DSSP) S



SS
TTTTTS

TT

T




GGGTTS
TTS
 .........150.........160.........170.........180.........190.........200.........210
Sequence PGFVHERPAARQAWANCLNRREQCGQCLITGERQKPIAQLHPSIKGGRDGVRGAQAVASIVSFNNTAFES
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Known secondary structure (DSSP) SS
GGGSS





TTT

SS

B
SS


BSTTSBTTS
S
S



SGGG

 .........220.........230.........240.........250.........260.........270.........280
Sequence YGKEQSINAPVSQEAAFSYVTALNYLLNPSNRQKVTIADATVVFWAERSSPAEDIFAGMFDPPRMHDLLV
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Known secondary structure (DSSP) TT

GGGGS

B
TTSS
TTSS

TTS


 .........290.........300.........310.........320.........330.........340.........350
Sequence AIRSGKRATDIMPDMDESVRFHVLGLSPNAARLSVRFWEVDTVGHMLDKVGRHYRELEIIPQFNNEQEFP
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Known secondary structure (DSSP) T


S


TTSB
SS


B



SSTTS
SS
 .........360.........370.........380.........390.........400.........410.........420
Sequence SLSTLLRQTAVLNKTENISPVLAGGLFRAMLTGGPYPQSLLPAVLGRIRAEHARPEDKSRYRLEVVTYYR
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Known secondary structure (DSSP)
TTSTTSSSTT

TTTT




TT



GGG

SS


SS
 .........430.........440.........450.........460.........470.........480.........490
Sequence AALIKAYLIRNRKLEVPVSLDPARTDRPYLLGRLFAVLEKAQEDAVPGANATIKDRYLASASANPGQVFH
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Known secondary structure (DSSP) S




SS

TT


STT
S

T
 .........500.........510.........520.........530.........540.........550.....
Sequence MLLKNASNHTAKLRKDPERKAIHYEIMMQEIIDNISDFPVTMSSDEQGLFMIGYYHQRKALFTKK
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Known secondary structure (DSSP) SS



TT
S


S


TTSS


Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


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Accessibility Statement
Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
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