Standard Mode | Switch to Expert Mode | Login to view past jobsRetrieve Phyre Job Id
 
Subscribe to Phyre at Google Groups
Email:
Visit Phyre at Google Groups
 Protein Homology/analogY Recognition Engine V 2.0


 

Fold library entry viewer: c8desA_

Fold library idPDB HeaderMoleculeTitle
c8desA_2.60PDB header: virusChain: A: PDB Molecule: major capsid protein;


Added to library: Sat Oct 15 12:29:16 2022
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence FGRKVPSNAKSQHNFSVIPSANIQRSVFNRSSGYKTTFDAGYLIPVFLDEALPGDTFHLKTSVLARLSTP
Predicted secondary structure











































SS confidence





































































Known secondary structure (DSSP)






ST











TTB

TT


B
 .........80.........90.........100.........110.........120.........130.........140
Sequence VVPFMDNLRLDIQYFSVPYRLVWDNWQKFNGEQKNPGDSTDYLIPQIKAPAGGFPVGSLADYFGVPTGVE
Predicted secondary structure


































SS confidence





































































Known secondary structure (DSSP) SS

S

GGGT
TTTT

SSTT









TT
S
TTST

TT
S
 .........150.........160.........170.........180.........190.........200.........210
Sequence NISVSALPFRAYNLIYNEWYRDENLINSAPLPLGDEEETGLANFPLRKRAKRHDYFTSALPWPQKGEGVE
Predicted secondary structure



































SS confidence





































































Known secondary structure (DSSP) S
STS
TTTS






SS

SSTT



B
B



TTTT
BSSSSSSS


 .........220.........230.........240.........250.........260.........270.........280
Sequence IGLGVPPSEGGEVVDNLTINSLRQAFQLQRLLERDARGGTRYIEIIRSHFGVISPDARVQRPEYLGSGSF
Predicted secondary structure






























SS confidence





































































Known secondary structure (DSSP)



B





B







SSS



SGGGT

 .........290.........300.........310.........320.........330.........340.........350
Sequence DININPVLQNSATTDASPQGNLAAYGVSGGVNRGFSHSFVEHCFVIGLVSVRADLTYQQGIPRMFSRQTR
Predicted secondary structure



































SS confidence





































































Known secondary structure (DSSP)


S


SS

TT




SS



B
SS



SG
 .........360.........370.........380.........390.........400.........410.........420
Sequence FDFYWPALAHLGEQAILNKEIYAQGNAKDDEVFGYQERYAEYRYRPSQITGKLRSTDPQSLDVWHLAQRF
Predicted secondary structure



































SS confidence





































































Known secondary structure (DSSP) GGS

GGGTTS

GGGT


SSGGGGS
TT



B

STTSTTSTT

GGG





 .........430.........440.........450.........460.........470.....
Sequence DSLPALNQEFIEENPPMKRVLAVQDEPQFIMDAFFDLKCVRPMPVYSVPGLIDHF
Predicted secondary structure






























SS confidence






















































Known secondary structure (DSSP) SS


SSB



BSSSSS
SSS
SS

S

SS


Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


Phyre is now FREE for commercial users!

All images and data generated by Phyre2 are free to use in any publication with acknowledgement

Accessibility Statement
Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
© Structural Bioinformatics Group, Imperial College, London
Michael Sternberg 
Disclaimer
Terms and Conditions
Structural Biology Group logo Imperial logo
BBSRC logo
Phyre2 is part of Genome3D