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 Protein Homology/analogY Recognition Engine V 2.0


 

Fold library entry viewer: c8ddwA_

Fold library idPDB HeaderMoleculeTitle
c8ddwA_4.70PDB header: membrane proteinChain: A: PDB Molecule: transient receptor potential cation channel, subfamily m,


Added to library: Sat Nov 5 10:50:20 2022
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence ISKHTQLSPTDAFGTIEFQGGGHSNKAMYVRVSFDTKPDLLLHLMTKEWQLELPKLLISVHGGLQNFELQ
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Known secondary structure (DSSP)

S








T
SS

TTS
TS




S


SS




 .........80.........90.........100.........110.........120.........130.........140
Sequence PKLKQVFGKGLIKAAMTTGAWIFTGGVNTGVIRHVGDALKDHASKSRGKICTIGIAPWGIVENQEDLIGR
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Known secondary structure (DSSP) TTTTT


BSSTTT




TTSSS
SSS


S
 .........150.........160.........170.........180.........190.........200.........210
Sequence DVVRPYQTMSNPMSKLTVLNSMHSHFILADNGTTGKYGAEVKLRRQLEKHISLQKINTRIGQGVPVVALI
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Known secondary structure (DSSP) S



GGG
S

B
S

SSS
SS


SS

SSSS




 .........220.........230.........240.........250.........260.........270.........280
Sequence VEGGPNVISIVLEYLRDTPPVPVVVCDGSGRASDILAFGHKYSEVTIQKTFTYTRTQAQHLFIILMECMK
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Known secondary structure (DSSP)
S

TSSS


TT

STT



GGG

SSSSTTT


 .........290.........300.........310.........320.........330.........340.........350
Sequence KKELITVFRMGSEGHQDIDLAILTALLKGANASAPDQLSLALAWNRVDIARSQIFIYGQQWPVGSLEQAM
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Known secondary structure (DSSP) T
TT
TTTSS


TTT

T
TT
SS




TT
 .........360.........370.........380.........390.........400.........410.........420
Sequence LDALVLDRVDFVKLLIENGVSMHRFLTISRLEELYNTRHGPSNTLYHLVRDVKKGNLPPDYRISLIDIGL
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Known secondary structure (DSSP) TT
TT



T

SS


TTTT


TT



 .........430.........440.........450.........460.........470.........480.........490
Sequence VIEYLMGGAYRCNYTRKRFRTLYHNLNHFPFPFHELMVWAVLMKRQKMALFFWQHGEEAMAKALVACKLC
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Known secondary structure (DSSP)
SS


STTS




S
T
TSSS
 .........500.........510.........520.........530.........540.........550.........560
Sequence KAMAHEASENDMVDDISQELNHNSRDFGQLAVELLDQSYKQDEQLAMKLLTYELKNWSNATCLQLAVAAK
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Known secondary structure (DSSP) SSS
S
B

GGGTT

TT
 .........570.........580.........590.........600.........610.........620.........630
Sequence HRDFIAHTCSQMLLTDMNKYLGPYVMMIGKMMIDLLIAVFNNTFFEVKSISNQVWKFQRYQLIMTFHERD
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Known secondary structure (DSSP)
TS



STT


TS


 .........640.........650.........660.........670.........680.........690.....
Sequence YGLKLFITDDELKKVHDFEEQCIEEYFREKDDRFNSSNDERIRVTSERVENMSMRLEEVNEREHS
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Known secondary structure (DSSP) SSS
B


S




Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


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Accessibility Statement
Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
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