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 Protein Homology/analogY Recognition Engine V 2.0


 

Fold library entry viewer: c8dc2A_

Fold library idPDB HeaderMoleculeTitle
c8dc2A_2.99PDB header: rna binding protein/rna/dnaChain: A: PDB Molecule: caslambda;


Added to library: Sat Dec 17 09:02:42 2022
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence HKKTESNQIIKTFSFKIKNANGLSLDVLNDAITEYQNYYNICSDWIKDHLTMKISELYKYIPNEKKNSGY
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Known secondary structure (DSSP)




SSS
SS

TTTSBGGGGGGGS
GGGTTS
 .........80.........90.........100.........110.........120.........130.........140
Sequence ALTLISDEWKDKPMYMMFKKGYPANNRDNAIYETLNTCNTEHYTGNILNFSDTYYRRFGYVASAISNYVT
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Known secondary structure (DSSP) STTTTTSBGGGGSSSSS

SS




SS


TT
 .........150.........160.........170.........180.........190.........200.........210
Sequence KISKMSTGSRSKNISNDSDVDTIMEQVIYEMEHNGWTSVKDWENQMEYLESKTDSNPNFVYRMTTLYEFY
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Known secondary structure (DSSP) TT


S



TT
SSS
TT

SSS


 .........220.........230.........240.........250.........260.........270.........280
Sequence KSHIDEVNSKMETMSIDSLIKFGGCRRKDSKKSMYIMGGSNTPFDITQIGGNSLNIKFSKNLNVDVFGRY
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Known secondary structure (DSSP) T
T






TT



SS


STT
TTT


T
 .........290.........300.........310.........320.........330.........340.........350
Sequence DVIKDNTLLVDIINGHGASFVLKIINDEIYIDINVSVPFDKKIATTNKVVGIDVNIKHMLLATNILDDGN
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Known secondary structure (DSSP) TTTTSS
TT







SS


SS
S

S
 .........360.........370.........380.........390.........400.........410.........420
Sequence VKGYVNIYKEVINDSDFKKVCNSTVMQYFTDFSKFVTFCPLEFDFLFSRVCNQKGIYNDNSAMEKSFSDV
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Known secondary structure (DSSP)
TT


TT
TT

TT



T


TT
 .........430.........440.........450.........460.........470.........480.........490
Sequence LNKLKWNFIETGDNTKRIYIENVMKLRSQMKAYAIVKNAYYKQQSEYDFGKSEEFIQEHPFSNTDKGIEI
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Known secondary structure (DSSP) T
TT

S
GGGS
 .........500.........510.........520.........530.........540.........550.........560
Sequence LNKLDNISKKILGCRNNIIQYSYNLFEINGYDMVSLEKLTSSQFKKKLSKFKDDFFNLMIKSIHFADIKD
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Known secondary structure (DSSP) T



SS
TT




TTTTT
 .........570.........580.........590.........600.........610.........620.........630
Sequence YFITLSNNGTAGVSLVPSYFTSQMDSIDHKIYFVNKHKVRSSQEKHINGLNADYNAARNIAYIMENTDCR
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Known secondary structure (DSSP) SSS
SSSTTTB
SSS

BB



GGGTTSSSB
TTSSB
 .........640.........650.........660.........670...
Sequence NMFMKQSRTDKSLYNKPSYETFIKTQGSAVAKLKKEGFVKILD
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Known secondary structure (DSSP)

SSS

TT

S


ST


B



Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


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Accessibility Statement
Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
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Michael Sternberg 
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