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 Protein Homology/analogY Recognition Engine V 2.0


 

Fold library entry viewer: c8dbaF_

Fold library idPDB HeaderMoleculeTitle
c8dbaF_3.50PDB header: circadian clock proteinChain: F: PDB Molecule: circadian clock protein kaic;


Added to library: Sat Mar 25 12:31:25 2023
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence GIGKSPTGIQGFDELTLGGLPTGRPSLVCGSAGCGKTLFASTFLINGVRDHGEPGVFVTFEERPEDIVNN
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Known secondary structure (DSSP)






S
TTTS
S
TTS
TTSSS


SSS
 .........80.........90.........100.........110.........120.........130.........140
Sequence VASLGFELDKLIEEEKIAIEHDLEGLFLRLELAIDTVGAKRVVLDTIESLFSAFSNPAILRAEIRRLFDW
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Known secondary structure (DSSP) TTT

TTS


T
SS

SSS
 .........150.........160.........170.........180.........190.........200.........210
Sequence LKERGLTTVITAERGDGALTRQGLEEYVSDCVILLDHRVENQISTRRLRIVKYRGTAHGTNEYPFLIDTD
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Known secondary structure (DSSP) T


B
SSSSS
SSSSGGGS
STTTTS



S

SS
 .........220.........230.........240.........250.........260.........270.........280
Sequence GFSVLPLLHQVHEERIASGVPDLDAMMAGGGFFRGSSILVSGVAGAGKSSLAAHFAAAACARGERAMYFS
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B


S
TTBTTSSSBTT
B
TTS
TT

 .........290.........300.........310.........320.........330.........340.........350
Sequence FEEAADQAVRNMRSLGLDLGRWRDAGLLRFMATRPTFYSLEMHLAVILREVMRFEPSVVVLDPISAFTES
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Known secondary structure (DSSP) SSS
TTT

T


TTTS


STGGGSSSS
 .........360.........370.........380.........390.........400.........410.........420
Sequence GDRLEVQSMLLRIVDFLKNRGITGIFTHLAGLSSLMDGWVLMLNREVNGEFNRELYLLKARGMAHSNQVR
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Known secondary structure (DSSP) S
TT


TSS

TT


TT

B

S
B
 .........430.........440.........450.........460.........470.........480.........490
Sequence EFLMSDRGISLLPPHLGEGGALTGTARKAEEARLRRAEIERQTELGRLQQQIEQRRRRARAQIEALEAEL
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Known secondary structure (DSSP)

TT





STT



S
 .........500
Sequence QAEEIALKAL
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Known secondary structure (DSSP)


Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


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Accessibility Statement
Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
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