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 Protein Homology/analogY Recognition Engine V 2.0


 

Fold library entry viewer: c8d8kd_

Fold library idPDB HeaderMoleculeTitle
c8d8kd_3.13PDB header: ribosomeChain: D: PDB Molecule: 37s ribosomal protein nam9, mitochondrial;


Added to library: Sat Dec 24 09:02:40 2022
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence DILAKNLFDRSHSNWAPVIDRLYVSEKRFMDIDSREFSVWLNGTVKYLPFHSILHLDEMLLEQINGDVVK
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Known secondary structure (DSSP)
TTSSS



SSSTTTTS


S

TTT
TTT
 .........80.........90.........100.........110.........120.........130.........140
Sequence FNTHMYECIFNNLGNLKPTNFNQDGTNDKVILKMKELLERYDKALKITEERINKVPKMTQAILNNCLKYS
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Known secondary structure (DSSP) S
S

S


SS










 .........150.........160.........170.........180.........190.........200.........210
Sequence TKCSSFHDMDYFITKFRDDYGITPNKQNLTTVIQFYSRKEMTKQAWNTFDTMKFLSTKHFPDICTYNTML
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Known secondary structure (DSSP) T





TT

STTS

 .........220.........230.........240.........250.........260.........270.........280
Sequence RICEKERNFPKALDLFQEIQDHNIKPTTNTYIMMARVLASSSSNAVVSEGKSDSLRLLGWKYLHELEDKN
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Known secondary structure (DSSP) T
TT



TTSTT
S
 .........290.........300.........310.........320.........330.........340.........350
Sequence LYRHKKDDLNLFLAMMALAAFDGDIELSRALYYLFIAKKYKTLCANWKGNILVDQDTIWKSTLMPEMLNY
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Known secondary structure (DSSP)



TT
T
SS
TTTT

 .........360.........370.........380.........390.........400.........410.........420
Sequence LMLAYARFDPRNLPVLSGYEKGIELRRKFLREFDSSMRLKFKLPFLPISDLNSEAQVLAESNAIWSFNME
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Known secondary structure (DSSP) T

TT


GGGTS







SSSS

ST
 .........430.........440.........450.........460.........470.........480.........490
Sequence NGGTRNTLTSSNEAALEDIKKYRQLLDSFAQEAEDFNEFKFKVMYEVTKMQRESINVNVFNKISLHTYLS
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Known secondary structure (DSSP) TTTTS
SS


SSSS
TTTSS
 .........500.........510.........520.........530.........540.........550.........560
Sequence IPINLKQQKEFLRRLTFFTFQQHEFEAVIKRLYEGYRNNLIMHDIWYITCLRHKIMMDTTLYELVMKAAI
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Known secondary structure (DSSP) T



GGG


 .........570.........580.........590.........600.........610.........620.........630
Sequence EFQNEDLAKKVWNDRGKFRTTVPFLKMDQRIRIAKDQKFAHLMVEFFTKQGKYSDAIAIILSSKNRFNWT
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Known secondary structure (DSSP) T
SS
T
TTTTS


 .........640.........650.........660
Sequence YSMVRNLHKALEEIEDRNSVEILLDVVNKK
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Known secondary structure (DSSP) TTTTT



Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


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Accessibility Statement
Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
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