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 Protein Homology/analogY Recognition Engine V 2.0


 

Fold library entry viewer: c8d3pA_

Fold library idPDB HeaderMoleculeTitle
c8d3pA_4.26PDB header: hydrolase/dnaChain: A: PDB Molecule: crispr-associated endonuclease cas1;


Added to library: Sat Nov 5 10:52:06 2022
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence MKKLLNTLYVTQPDTYLSLDGDNVVLLKEQEKLGRLPLHNLEAIVGFGYTGASPALMGYCAERNISITFL
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Known secondary structure (DSSP)

SS
SSS
TTSSS

TT


SS



TT
 .........80.........90.........100.........110.........120.........130.........140
Sequence TKNGRFLARVVGESRGNVVLRKTQYRISENDQESTKIARNFITGKVYNSKWMLERMTREHPLRVNVEQFK
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Known secondary structure (DSSP)
TTS


S

STTTT

STT

 .........150.........160.........170.........180.........190.........200.........210
Sequence ATSQLLSVMMQEIRNCDSLESLRGWEGQAAINYNKVFDQMILQQKEEFAFHGRSRRPPKDNVNAMLSFAY
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Known secondary structure (DSSP) TT


GGG

S
TTT







SS
BST
 .........220.........230.........240.........250.........260.........270.........280
Sequence TLLANDVAAALETVGLDAYVGFMHQDRPGRASLALDLMEELRGLYADRFVLSLINRKEMTADGFYKKENG
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Known secondary structure (DSSP) T

TT

SSS


TTS
TTTTTT


GGG
TTS
 .........290.........300.........310.........320.........330.........340...
Sequence AVLMTDEARKTFLKAWQTKKQEKITHPYLGEKMSWGLVPYVQALLLARFLRGDLDEYPPFLWK
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Known secondary structure (DSSP) B
TT

TTT

GGGTSS
SS







Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


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Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
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Michael Sternberg 
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