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 Protein Homology/analogY Recognition Engine V 2.0


 

Fold library entry viewer: c8d0kA_

Fold library idPDB HeaderMoleculeTitle
c8d0kA_4.27PDB header: replication/dnaChain: A: PDB Molecule: cst complex subunit ctc1;


Added to library: Sat Jun 25 08:59:44 2022
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence PSSEQAWLEDAQVFIQKTLCPAVKEPNVQLTPLVIDCVKTVWLSQGRNQGSTLPLSYSFVSVQDLKTHQR
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Known secondary structure (DSSP)
SS
SSS


TTSS

SS
SS
SSS



 .........80.........90.........100.........110.........120.........130.........140
Sequence LPCCSHLSWSSSAYQAWAQEAGPNGNPLPREQLLLLGTLTDLSADLEQECRNGSLYVRDNTGVLSCELID
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Known secondary structure (DSSP) S
TT

T
TT




B





SSSTTTS




TT
SS
 .........150.........160.........170.........180.........190.........200.........210
Sequence LDLSWLGHLFLFPRWSYLPPARWNSSGEGHLELWDAPVPVFPLTISPGPVTPIPVLYPESASCLLRLRNK
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Known secondary structure (DSSP)

TTSTTS
S

SSTT






S

SS








S

B

GGG
 .........220.........230.........240.........250.........260.........270.........280
Sequence LRGVQRNLAGSLVRLSALVKSKQKAYFILSLGRSHPAVTHVSIIVQVPAQLVWHRALRPGTAYVLTELRV
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Known secondary structure (DSSP)
SS




B

SS

B
SSS





GGGGGGGGT

SS
 .........290.........300.........310.........320.........330.........340.........350
Sequence SKIRGQRQHVWMTSQSSRLLLLKPECVQEVRYSRLLSYSGAVTGVLNEPAGLYELDGQLGLCLAYQQFRG
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Known secondary structure (DSSP)


TT
SS


TT



TTS


TTTTTTT
TTS

TT
 .........360.........370.........380.........390.........400.........410.........420
Sequence LRRVMRPGVCLQLQDVHLLQSVGGGTRRPVLAPCLRGAVLLQSFSRQKPGAHSSRQAYGASLYEQLVWER
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Known secondary structure (DSSP) TTTT

SS



BTTB
S









SGGGTS


TTT
 .........430.........440.........450.........460.........470.........480.........490
Sequence QLGLPLYLWATKALEELACKLCPHVLRHHQFLQHSSPGSPSLGLQLLAPTLDLLAPPGSPVRNAHNEILE
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Known secondary structure (DSSP)


TTTSS
T


BTTB

S
S





S
 .........500.........510.........520.........530.........540.........550.........560
Sequence EPHHCPLQKYTRLQTPSSFPTLATLKEEGQRKAWASFDPKALLPLPEASYLPSCQLNRRLAWSWLCLLPS
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Known secondary structure (DSSP) SS


TTT






B


T

S
TTTGGG

T
GG
 .........570.........580.........590.........600.........610.........620.........630
Sequence AFCPAQVLLGVLVASSHKGCLQLRDQSGSLPCLLLAKHSQPLSDPRLIGCLVRAERFQLIVERDVRSSFP
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Known secondary structure (DSSP) GSSS
B

SSS


SS


B

STT
B


STTTT
SS



 .........640.........650.........660.........670.........680.........690.........700
Sequence SWKELSMPGFIQKQQARVYVQFFLADALILPVPRPGQSRLFLLCHKEALMKRNFCVPPGASPEVPKPALS
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Known secondary structure (DSSP) SSGGGSSS

TTTS









B


TTS






 .........710.........720.........730.........740.........750.........760.........770
Sequence FYVLGSWLGGTQRKEGTGWGLPEPQGNDDNDQKVHLIFFGSSVRWFEFLHPGQVYRLVAPGPATPMLFEK
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Known secondary structure (DSSP)
SS
TT








SS
S
GGGGGGGGG

TT

SS

SSSSSS
 .........780.........790.........800.........810.........820.........830.........840
Sequence DGSSCISRRPLELAGCASCLTVQDNWTLELESSQDIQDVLDANKSLPESSLTDLLSDNFTDSLVSFSAEI
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Known secondary structure (DSSP)

SSS



BTTTTT
S





TT


TTTTTT

S












 .........850.........860.........870.........880.........890.........900.........910
Sequence LSRTLCEPRRCVKLTVALETAECEFPPHLDVYIEDPHLPPSLGLLPGARVHFSQLEKRVSRSHNVYCCFR
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Known secondary structure (DSSP)






SS
SS


SS



TT

TT

TTS


 .........920.........930.........940.........950.........960.........970.........980
Sequence SSTYVQVLSFPPETTISVPLPHIYLAELLQGGQSPFQATASCHIVSVFSLQLFWVCAYCTSICRQGKCTR
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Known secondary structure (DSSP) TT





SS






B

TTGGGS
SS

STTT

BTTTT
 .........990.........1000.........1010.........1020.........1030.........1040.........1050
Sequence LGSTCPTQTAISQAIIRLLVEDGTAEAVVTCRNHHVAAALGLCPREWASLLDFVQVPGRVVLQFAGPEPM
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Known secondary structure (DSSP) TTTS
SS


SS

TTT

TTT



S


 .........1060.........1070.........1080.........1090.........1100.........1110......
Sequence TMFLWTLCTSPSVLRPIVLSFELERKPSKIVPLEPPRLQRFQCGELPFLTHVNPRLRLSCLSIRES
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Known secondary structure (DSSP) TSTTT

SS
TT










SSS









Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


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Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
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