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  Protein Homology/analogY Recognition Engine V 2.2
 

Fold library entry viewer: c8cszD_

Fold library idPDB HeaderMoleculeTitle
c8cszD_3.20PDB header: rna binding protein/rna/dnaChain: D: PDB Molecule: iscb;


Added to library: Wed Jun 22 00:44:39 2022
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence MAVVYVISKSGKPLMPTTRCGHVRILLKEGKARVVERKPFTIQLTYESAEETQPLVLGIDPGRTNIGMSV
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Known secondary structure (DSSP)



SSS


SSTTSTTTTSS










SS
B
 .........80.........90.........100.........110.........120.........130.........140
Sequence VTESGESVFNAQIETRNKDVPKLMKDRKQYRMAHRRLKRRCKRRRRAKAAGTAFEEGEKQRLLPGCFKPI
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Known secondary structure (DSSP)
SSS

GGGTT
S
SSS


TT
SS
 .........150.........160.........170.........180.........190.........200.........210
Sequence TCKSIRNKEARFNNRKRPVGWLTPTANHLLVTHLNVVKKVQKILPVAKVVLELNRFSFMAMNNPKVQRWQ
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Known secondary structure (DSSP)
SS






S




TT


S






SSTTTSSS

GGG
 .........220.........230.........240.........250.........260.........270.........280
Sequence YQRGPLYGKGSVEEAVSMQQDGHCLFCKHGIDHYHHVVPRRKNGSETLENRVGLCEEHHRLVHTDKEWEA
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Known secondary structure (DSSP) GTS
TTSSS
STTTB
SSSSSB

SS
TTTTB

STTT

 .........290.........300.........310.........320.........330.........340.........350
Sequence NLASKKSGMNKKYHALSVLNQIIPYLADQLADMFPGNFCVTSGQDTYLFREEHGIPKDHYLDAYCIACSA
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B
S
SSTT





SS
 .........360.........370.........380.........390.........400.........410.........420
Sequence LTDAKKVSSPKGRPYMVHQFRRHDRQACHKANLNRSYYMGGKLVATNRHKAMDQKTDSLEEYRAAHSAAD
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Known secondary structure (DSSP)
SS

S




S



S









TTSSSS

TT

S

S
 .........430.........440.........450.........460.........470.........480.........490
Sequence VSKLTVKHPSAQYKDMSRIMPGSILVSGEGKLFTLSRSEGRNKGQVNYFVSTEGIKYWARKCQYLRNNGG
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Known secondary structure (DSSP) T






TTS

TT

TT

TTTT

GGG



S
 ....
Sequence LQIY
Predicted secondary structure
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Known secondary structure (DSSP)


Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


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Accessibility Statement
Please cite: Phyre2.2: A Community Resource for Template-based Protein Structure Prediction
Powell HR et al. Journal of Molecular Biology (2025) in press DOI: https://doi.org/10.1016/j.jmb.2025.168960
 
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