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 Protein Homology/analogY Recognition Engine V 2.0


 

Fold library entry viewer: c8ck0A_

Fold library idPDB HeaderMoleculeTitle
c8ck0A_3.80PDB header: virusChain: A: PDB Molecule: portal protein;


Added to library: Sat Mar 18 10:38:06 2023
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence ETKRQRYNKRLHALKTERSSWEGSWRDISDHIQPWRSRFCMSDSNKGNRHNKALVDDTPFKASRTLASGM
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Known secondary structure (DSSP)

GGGT
TTT



STTTT






S
SS
 .........80.........90.........100.........110.........120.........130.........140
Sequence MSGLTSPARPWFKLAIDNPELMESAAVKQWLYLVTQRMQSVMSKSNLYNQLHQLYGELGTFGTSCILIVE
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Known secondary structure (DSSP) S
SSS



S
SSSSB
 .........150.........160.........170.........180.........190.........200.........210
Sequence DKEDVIRAIPMTVGTYYLATSSRGMVDTIYREMRKTVRQLVQEFGLKNCSNSVQTMYDNDNLEAWVEVVH
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Known secondary structure (DSSP)
SSSS
TTS
TTSST
GGGS
TT
TT
 .........220.........230.........240.........250.........260.........270.........280
Sequence LIEPNKPYRSVYYESGCTEDKLLRESGFDEFPGVAPRWEVLGDDVYGYGPGHAALGPSRSLQVMQKKKAQ
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Known secondary structure (DSSP)



SSS

S

SSS



BSB

SS
SS
B
 .........290.........300.........310.........320.........330.........340.........350
Sequence AVEKQINPPMNVPSSSKSKPFSLLPGSLNYYDAAMGGQQMAQPSQSVNLNLNSIMEDIVAHQTSIKETFY
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Known secondary structure (DSSP) S



TTS


GGGSSTT





SSS
S

S
SS




TT
 .........360.........370.........380.........390.........400.........410.........420
Sequence ADLVVERLDTEALDPMIDRVFGIMMRGGHLPPPPEEIQGVDLNVQYISVMAQAQKLVGIGAIERITSFVG
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Known secondary structure (DSSP)



TTTTTTT
S



TTSSS



SSSSS
 .........430.........440.........450.........460.........470........
Sequence NLAGADPSALDKLNIDQAIDQYSNSVSAPPDIIRTDDEVAEIRQARAQQQQQAQAMEM
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Known secondary structure (DSSP) GGGT
GGGGGTT
T

GGGS



Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


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Accessibility Statement
Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
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