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 Protein Homology/analogY Recognition Engine V 2.0


 

Fold library entry viewer: c8cdjD_

Fold library idPDB HeaderMoleculeTitle
c8cdjD_3.40PDB header: ligaseChain: D: PDB Molecule: cullin-associated nedd8-dissociated protein 1;


Added to library: Sat Apr 22 11:38:34 2023
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence SYHISNLLEKMTSSDKDFRFMATNDLMTELQKDDDSERKVVKMILKLLEDKNGEVQNLAVKCLGPLVSKV
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Known secondary structure (DSSP)
TTSS
S



SGGG
SSTTS
 .........80.........90.........100.........110.........120.........130.........140
Sequence KEYQVETIVDTLCTNMLSDKEQLRDISSIGLKTVIGELAANVCKKITGRLTSAIAKQEDVSVQLEALDIM
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Known secondary structure (DSSP)
TSS





S
 .........150.........160.........170.........180.........190.........200.........210
Sequence ADMLSRQGGLLVNFHPSILTCLLPQLTSPRLAVRKRTIIALGHLVMSCGNIVFVDLIEHLLSELSKNDSM
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Known secondary structure (DSSP) SS
GGGGGGGGGGG
SST

S


 .........220.........230.........240.........250.........260.........270.........280
Sequence STTRTYIQCIAAISRQAGHRIGEYLEKIIPLVVKFCNVDDDELREYCIQAFESFVRRCPKEVYPHVSTII
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Known secondary structure (DSSP)
GGGGGGTSS

GGG
 .........290.........300.........310.........320.........330.........340.........350
Sequence NICLKYLTYDPNYNYYSDDDDMSWKVRRAAAKCLDAVVSTRHEMLPEFYKTVSPALISRFKEREENVKAD
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Known secondary structure (DSSP) TT

TT









TT

TTGGG
S
 .........360.........370.........380.........390.........400.........410.........420
Sequence VFHAYLSLLKQTRTPLTMLQSQVPNIVKALHKQMKEKSVKTRQCCFNMLTELVNVLPGALTQHIPVLVPG
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Known secondary structure (DSSP)

TT
S
STTTTTT
 .........430.........440.........450.........460.........470.........480.........490
Sequence IIFSLNDKSSSSNLKIDALSCLYVILCNHSPQVFHPHVQALVPPVVACVGDPFYKITSEALLVTQQLVKV
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Known secondary structure (DSSP) T
SS

TS
TTTTSTTT
SS
 .........500.........510.........520.........530.........540.........550.........560
Sequence IRPLDQPSSFDATPYIKDLFTCTIKRLKAADIDQEVKERAISCMGQIICNLGDNLGSDLPNTLQIFLERL
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Known secondary structure (DSSP) S
SSS





T
SSS
S
TTTGGGT
 .........570.........580.........590.........600.........610.........620.........630
Sequence KNEITRLTTVKALTLIAGSPLKIDLRPVLGEGVPILASFLRKNQRALKLGTLSALDILIKNYSDSLTAAM
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Known secondary structure (DSSP) TSSSSTT
SS



TTSS


TTS

 .........640.........650.........660.........670.........680.........690.........700
Sequence IDAVLDELPPLISESDMHVSQMAISFLTTLAKVYPSSLSKISGSILNELIGLVRSPLLQGGALSAMLDFF
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Known secondary structure (DSSP) SSSS

GGGGGGGTTT
TT

T
 .........710.........720.........730.........740.........750.........760.........770
Sequence QALVVTGTNNLGYMDLLRMLTGPVYSQLTHKQSYYSIAKCVAALTRACPKEGPAVVGQFIQSIRLLALLS
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Known secondary structure (DSSP)
BTTB





S



 .........780.........790.........800.........810.........820.........830.........840
Sequence LGEVGHHIDLELKSVILEAFSSPSEEVKSAASYALGSISVLPEYLPFVLQEITSQPKRQYLLLHSLKEII
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Known secondary structure (DSSP) TTT



S
S


TTT
SSTT
 ...
Sequence SSA
Predicted secondary structure

SS confidence


Known secondary structure (DSSP) T


Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


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Accessibility Statement
Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
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