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 Protein Homology/analogY Recognition Engine V 2.0


 

Fold library entry viewer: c8c8qA_

Fold library idPDB HeaderMoleculeTitle
c8c8qA_3.36PDB header: membrane proteinChain: A: PDB Molecule: cytochrome c oxidase subunit 1;


Added to library: Sat Mar 4 10:00:37 2023
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence NSWWTYVNRWIFSTNAKDIAILYLLFGLVSGIIGSVFSFIIRMELSAPGSQFLSGNGQLYNVAISAHGIL
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Known secondary structure (DSSP)
TS


STSSSS

SS
S
S
 .........80.........90.........100.........110.........120.........130.........140
Sequence MIFFFIIPALFGAFGNYLVPLMIGAPDVAYPRVNNFTFWLLPPALMLLLISALTEEGPGGGWTVYPPLSS
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Known secondary structure (DSSP) SSTTST
SS
SSTTTSSS


S
SS

TGGGS
 .........150.........160.........170.........180.........190.........200.........210
Sequence ITSHSGPAIDLAILSLQLTGISSTLGSVNLIATMINMRAPGLSLYQMPLFAWAIMITSILLLLTLPVLAG
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Known secondary structure (DSSP) TTTS
STTTT


TT

STTS
 .........220.........230.........240.........250.........260.........270.........280
Sequence GLFMLFSDRNLNTSFYAPEGGGDPVLYQHLFWFFGHPEVYILIMPAFGVVSHIIPSLAHKPIFGKEGMLW
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Known secondary structure (DSSP) S


SS
TTTT

TTTTTTS

S
 .........290.........300.........310.........320.........330.........340.........350
Sequence AMLSIALLGLMVWSHHLFTVGLDVDTRAYFSAATMVIAIPTGIKIFSWLATLTGGAIQWSRVPMLYAIGF
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Known secondary structure (DSSP) TSS

GGG
SSS


TTTTS


TTS
 .........360.........370.........380.........390.........400.........410.........420
Sequence LILFTIGGLTGVILSNSVLDIAFHDTYFVVAHFHYVLSMGALFGLCGAYYYWSPKMFGLMYNETLASIQF
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Known secondary structure (DSSP) TTSTTTTTBT




 .........430.........440.........450.........460.........470.........480.........490
Sequence WILFIGVNIVFGPQHFLGLNGMPRRIPDYPEAFVGWNFVSSIGSVISILSLFLFMYVMYDQFTSNRVVKT
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Known secondary structure (DSSP) STT
BSS
SS

TT

TS




S
 .........500.........510.........520.........530.......
Sequence NPYLIPSYFDDNVIFVNEKLGVAQSIEWLLHSPVHEHAFNTLPTKSI
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Known secondary structure (DSSP)
TT



SS

TTS
S

SSGGGTS
SS

SS

SS






Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


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Accessibility Statement
Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
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Michael Sternberg 
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