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 Protein Homology/analogY Recognition Engine V 2.0


 

Fold library entry viewer: c8bx8C_

Fold library idPDB HeaderMoleculeTitle
c8bx8C_UNKPDB header: Blank PDB headerPDB COMPND:


Added to library: Sat May 13 11:22:58 2023
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence PLVWTQLKQTGTTQPTARSGHTIITVGKTHIMFGGLDNDKNNYKDGKIAPNNQVFTLKLTQNNCEWRQIA
Predicted secondary structure








































SS confidence





































































Known secondary structure (DSSP)




B
SSS




SSTT


SS

SS
SSS





TT

 .........80.........90.........100.........110.........120.........130.........140
Sequence CQGDVPLPRCYHASCAISADKMLVFGGSYTSNLRFNDTYILKTTSYQWSKPANQISGGEPKNAESKIGAP
Predicted secondary structure




















































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Known secondary structure (DSSP)

SB




SS
TTTTTTTTTT

TTTTSS



S


SSSSS
 .........150.........160.........170.........180.........190.........200.........210
Sequence QPRYGHSATFFEGKVYIFGGHGGINYQRLAFNDLYVLETENFEWTRLEPKGNPPDPRGGHSAAMMANKPQ
Predicted secondary structure










































SS confidence





































































Known secondary structure (DSSP)


SS

TT


S

SSS







TTT




SS





BS
STTSS
 .........220.........230.........240.........250.........260.........270.........280
Sequence LMIFGGWSFTSQYSNIMIYDIEKDEWVDPEIAHEIPKWNLSGIMAPSIPSWKYFIFGGSVGSFEEGGNRT
Predicted secondary structure
























































SS confidence





































































Known secondary structure (DSSP)
SS

STTSS
B



B
SS

BS


SSS






SSS


 .........290.........300.........310.........320.........330.........340.........350
Sequence NSRFVDDSFVLDIDTLSWSSINLEADETSKAVCKPRPRESASIFYDSGESRAIVFGGWANNWLNDLWALN
Predicted secondary structure














































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Known secondary structure (DSSP)





TTTT



S

TTSSS






SS

TTTT



SSS




 .........360.........370.........380.........390.........400.........410.........420
Sequence VSTITGPPIFSIKPALGPLTGKTKVLIEGDGFKDTQNISVKFSGGKLEKEVNGTFVNEKEISCETPTFDY
Predicted secondary structure











































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Known secondary structure (DSSP)
SSS







B

SSS


SS


SSS


SSS

TT



SS
 .........430.........440.........450.........460.........470.........480.........490
Sequence PRSVEVTVCMNKGDYTITKSAFTYNTKADKTIAYGPGLLTENLIGVQTTIVIQARNGSDEFVVTIRNPAK
Predicted secondary structure













































SS confidence





































































Known secondary structure (DSSP)
S


SSS


SS
B








STTSTT


SSS









SS
 .........500.........510.........520.........530.........540.........550.........560
Sequence IKKEEEVKEGDKANTKNTIKEDEEEEGEDEEENKKKKEAEKNDLTGSAVMNYISKQLKDIQEFIENTKEN
Predicted secondary structure





















SS confidence





































































Known secondary structure (DSSP)
TTT
SS
S


TT
TT



 .........570.........580.........590.........600.........610.........620.........630
Sequence IEIRNKNISELINVMINLEKVRVKNDDDVLTLDTVEEMLNFLKKKKDSDIKKCKKLQEEWKNLAKMAQAV
Predicted secondary structure










SS confidence





































































Known secondary structure (DSSP)



 .........640.........650.........660.........670.........680.........690.........700
Sequence KKDIQNPVKTESDKTKENIKKFEEITLKEYANSLKKESFFIYKTGVSESFKRIGEVKQKVDEFEVQLNQY
Predicted secondary structure








SS confidence





































































Known secondary structure (DSSP) SST
 .........710.........720.........730.........740.........750.........760.........770
Sequence EDFARIGSKKLMEQIRTDVSSVEKLWVRIEISEKTMDEYKKMKWGSINSMDMEDEIKKLRKALTDLRGID
Predicted secondary structure










SS confidence





































































Known secondary structure (DSSP)

TTS
TTTS
S

STT
 .........780.........790.........800.........810.........820.........830.........840
Sequence KRSNAFIGITEELKKWATFLPLLGELKDPSMNSEDGRHWKKLKDLVKKEFDVSQELMLEIIWDLKLFDYK
Predicted secondary structure


























SS confidence





































































Known secondary structure (DSSP) S
TTST

STTTTS




SS

TT
SSTT
 .........850.........860.........870.........880.........890.........900.........910
Sequence DGIEEITDQAKQELKMEKALKKIIDFWRDIEFELVQHKNTDIHTLKMSEENFETLEDHQLQINNMLLSKY
Predicted secondary structure










SS confidence





































































Known secondary structure (DSSP)


STTSS


SS
 .........920.........930.........940.........950.........960.........970.........980
Sequence VAYFEKEVEKWKYDLGSVYDVVQLLLEVQKTWSFLENLFEVKRELPNESAQFVGIDKDMKEIMQKGCDIK
Predicted secondary structure



SS confidence





































































Known secondary structure (DSSP)
TTT


TTTS
TT
 .........990.........1000.........1010.........1020.........1030.........1040.........1050
Sequence NCLKFCTIEGMLKRLENIQAQLKVCEKALNEFLDSKRRAFPRFYFVSVNDLLDILSNGNSPAKINRHMSK
Predicted secondary structure
















SS confidence





































































Known secondary structure (DSSP)
SS
SGGGGTS
T
S
 .........1060.........1070.........1080.........1090.........1100.........1110.........1120
Sequence IFQAIDNLQLKEDSSGGRPTLKMISCVGTEEVDFSSPRLLQGKVESYLKDVIDTMIGTLKSVANSSFKNF
Predicted secondary structure























SS confidence





































































Known secondary structure (DSSP)
SS






SSSS





TTS

SS




S
 .........1130.........1140.........1150.........1160.........1170.........1180.........1190
Sequence QSMTRKEWLKSDPSQITLLVNNIIWSKAVEDCFLKLQSGDINAMKLFLDESIKQLTELIGMVQGDLSKPL
Predicted secondary structure













SS confidence





































































Known secondary structure (DSSP) S
S
T
TTT
STTS
 .........1200.........1210.........1220.........1230.........1240.........1250.........1260
Sequence RQKIMCLITIDTHSRDVVHRLINEHVRKAEEFQWQSQLKFYWVDNDAKIKIADARFVYNYEYLGNGPRLV
Predicted secondary structure
























SS confidence





































































Known secondary structure (DSSP) TT

TT
SS

SSSSSS








S




 .........1270.........1280.........1290.........1300.........1310.........1320.........1330
Sequence ITPLTDRIYVTATQALHLKMGCAPAGPAGTGKTETTKDLANALAKACYVFNCSSEMNYESMGNIYKGLAS
Predicted secondary structure
























SS confidence





































































Known secondary structure (DSSP)

TT




TTS
T

B


TTT

 .........1340.........1350.........1360.........1370.........1380.........1390.........1400
Sequence SGCWGCFDEFNRLLPEVLSVCSVQFKAVTDAIKQNVERFIIEGDEISLDPTCGVFITMNPGYLGRAELPE
Predicted secondary structure

























SS confidence





































































Known secondary structure (DSSP)

BTGGGS
T
STT

TT



TTSSS




 .........1410.........1420.........1430.........1440.........1450.........1460.........1470
Sequence GLKALFRPITVVVPDLELICENMLMAEGFIEAKILAKKFVTLYMLCRDLLSKQLHYDWGLRAIKSVLVVA
Predicted secondary structure
















SS confidence





































































Known secondary structure (DSSP)






TTT
TTTS


TT


S
 .........1480.........1490.........1500.........1510.........1520.........1530.........1540
Sequence GGFKRSEPEIAEQALLMRALRDFNIPKIAFQDLYVFHGLLGDLFPGINIKPKKDLDFEKIITDVCIENKL
Predicted secondary structure





















SS confidence





































































Known secondary structure (DSSP)
SSS
TTTS
STT







SSS
 .........1550.........1560.........1570.........1580.........1590.........1600.........1610
Sequence DPDPEFVLKVVQLSELLAIRHCVFVMGPPGAGKSTTWKILAKAQDKTNKKTTLIDIDPKVVSTKDFYGYN
Predicted secondary structure

























SS confidence





































































Known secondary structure (DSSP)



S
SS
SSSS




TTTS
SS

 .........1620.........1630.........1640.........1650.........1660.........1670.........1680
Sequence LPSKEWKDGLFSKMLRSLAEQPDTNPKWICLDGDLDANWIESMNSVMDDNKILTLANNERIPLKPHMRAL
Predicted secondary structure































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Known secondary structure (DSSP)
TTS




S
SSS
S


TTTTTTSSSS

TTS


TT
 .........1690.........1700.........1710.........1720.........1730.........1740.........1750
Sequence FEIRDLRFATPATVSRAGILYISDEVGYQWRSYVKSWIKQEFSQDQEMSKNLDTLFGKYVPDTLDHIKKH
Predicted secondary structure



















SS confidence





































































Known secondary structure (DSSP)
SS

SS
S

SSS
TSS
T
 .........1760.........1770.........1780.........1790.........1800.........1810.........1820
Sequence CRFLVPVSPISQVISICKSLQTLLKGDVKNLEYLFVYALIWAIGGALAEKDSIDYRKDFSTWWKGAWKTA
Predicted secondary structure















SS confidence





































































Known secondary structure (DSSP)


SS



S
S
STTT
SSBTTB
SS

S
 .........1830.........1840.........1850.........1860.........1870.........1880.........1890
Sequence VKFPSKGTIFDYYVDQSGDSSKFVEWSKRLENKEFDPQVETMGNITVNTIETLATTEFIKSYLMVKHPSL
Predicted secondary structure




































SS confidence





































































Known secondary structure (DSSP) S



SS
TT


TTSS

S




SS


TTTS
TTT




T

 .........1900.........1910.........1920.........1930.........1940.........1950.........1960
Sequence LIGNSGCGKTQLAKGILKEIVQAKPENYAYQLINFNYYTDSTYLQGQIEQTLEKKAGRQYGPPGKVQLIY
Predicted secondary structure































SS confidence





































































Known secondary structure (DSSP)
SSSSSS
TTT


TB

T
B
TTSSSSB
TTSS
 .........1970.........1980.........1990.........2000.........2010.........2020.........2030
Sequence FIDDLNMPQLDAYDTQTAIALLRQLADYGHFYDVSKLALKDIINTQVLAAMNPSAGSFFVNPRYQRHFWT
Predicted secondary structure





































SS confidence





































































Known secondary structure (DSSP)

TTSSB

BTTB
TS
TTT


SS


SSSS
S
S
S
 .........2040.........2050.........2060.........2070.........2080.........2090.........2100
Sequence ISIPFPDNESLSLIYITFLNGHLKRFKSTIQEYSNIIVRASLMLHQAVTQNFRKTAINFHYEFNLRHMSN
Predicted secondary structure


















SS confidence





































































Known secondary structure (DSSP)




SSSS
SS


SSSGGG


 .........2110.........2120.........2130.........2140.........2150.........2160.........2170
Sequence VFQGLLLSDPNKFTEPDKLIKLWIHECERTYGDRLVSTDNLKTYKENIFDIVKKSFSKFNFSRYFGNNPE
Predicted secondary structure



















SS confidence





































































Known secondary structure (DSSP) S
TTS


TTTSS

SS

S


TTTSSSS

 .........2180.........2190.........2200.........2210.........2220.........2230.........2240
Sequence NLIYCNFIAGINSDRFYDQMPNNEMEKHISEALKEYNDNNAFMGLVLFEDAMKHVCRICRIVLPSSGHAL
Predicted secondary structure





























SS confidence





































































Known secondary structure (DSSP)

S
SS
SSS




SS






TSSSS

 .........2250.........2260.........2270.........2280.........2290.........2300.........2310
Sequence LVGVGGSGKQSLSKLASFIMGYTTFSITISATYSMVDLRNDLQQLYFKCGPKEEGILFLFTEGQITNERF
Predicted secondary structure























SS confidence





































































Known secondary structure (DSSP)
SS
SSTT




TT

TTS


STT

STT
 .........2320.........2330.........2340.........2350.........2360.........2370.........2380
Sequence LVYINDLLSSGEIAELYTLDEKEAMINQVRAKVKGEGKPDTRENCWNWFIDQVKKNLHMAICFSPVGDMR
Predicted secondary structure



















SS confidence





































































Known secondary structure (DSSP)
S

TTSS
T



ST
SSSSS
 .........2390.........2400.........2410.........2420.........2430.........2440.........2450
Sequence RRARQFPALVNCTVIDWFQPWPYEALFNVAKSFLEPVDLGDDKVREAVVKFMPFSFTLVNDLGLKLLEQE
Predicted secondary structure
















SS confidence





































































Known secondary structure (DSSP)
STS




TTS

SS
 .........2460.........2470.........2480.........2490.........2500.........2510.........2520
Sequence RRYAYTTPKSFLELISLFTNMLAQKRESLERNKERYETGLVKLKETAEQVAIIEVEVKEKQVEAEAKKKE
Predicted secondary structure


SS confidence





































































Known secondary structure (DSSP)






 .........2530.........2540.........2550.........2560.........2570.........2580.........2590
Sequence ADAFAEVVGREKDKVEKENSKATIEADKCGLIKQNVEAQKSSTQQDLDAAQPLVEQAKSALNSISKKDFQ
Predicted secondary structure


SS confidence





































































Known secondary structure (DSSP) S

 .........2600.........2610.........2620.........2630.........2640.........2650.........2660
Sequence QAKSFASPPAGVPEVFAATIYLLAGYFNEAIEIDKNKKPKDVSWKSSLKLMKSPEEFMEKLLNFKDVVDA
Predicted secondary structure































SS confidence





































































Known secondary structure (DSSP)

S

TTT
TTTT
SS

SSSSS


S

S

TT
 .........2670.........2680.........2690.........2700.........2710.........2720.........2730
Sequence NQVANVNIVKNQYLNMPSFTPEQMASKSAAAKGICSWVVNIVKYYDVIQDVEPKRKALKEATEQLEEATV
Predicted secondary structure






SS confidence





































































Known secondary structure (DSSP) S


SSS


 .........2740.........2750.........2760.........2770.........2780.........2790.........2800
Sequence KLNEVEEVVRKLNEELNKLKAENDKAIAERNAAISEAERCARRLNLAQRLVTALSSENERWGKSIIQLED
Predicted secondary structure
SS confidence





































































Known secondary structure (DSSP)
 .........2810.........2820.........2830.........2840.........2850.........2860.........2870
Sequence QLKLMVGDVLVASSFVSYSGPFNKKFRNIMINQNFMKFMKEHTIPMSPDPNPIKILTDESTIALWNKQKL
Predicted secondary structure


















SS confidence





































































Known secondary structure (DSSP) TSSS
TTTTTT



S


SS
TTT
 .........2880.........2890.........2900.........2910.........2920.........2930.........2940
Sequence PSDSVSIENGTILTNSARYPLMIDPQLQGITWIREKEKANNLKILRLGSKNINRDLELSIENGYSAIIEN
Predicted secondary structure

























SS confidence





































































Known secondary structure (DSSP)



SS


SS
GGGS


B

SSSST



B
 .........2950.........2960.........2970.........2980.........2990.........3000.........3010
Sequence MNERIDAILMPIIARSFIKRGKNKIIKFAGKDLILHPNFKLFLHTKLSNPHYPPEIQAEAALINFTVTEA
Predicted secondary structure























SS confidence





































































Known secondary structure (DSSP)
S


TTTT


BSSSSB

SS



SS



B

SS



TT



 .........3020.........3030.........3040.........3050.........3060.........3070.........3080
Sequence GLGDQLLSLVVARERPDLAKMKIELITQQNDFKIKLKDLEDELLYKLANAKGDILDDIELIENLEYSKKL
Predicted secondary structure










SS confidence





































































Known secondary structure (DSSP)
TT



TTT

 .........3090.........3100.........3110.........3120.........3130.........3140.........3150
Sequence SVEIAEKVAAAKITEAKINETSENYRPAASRGALFYFLLSDLSKVHSFYKYSLESFIVVINRAIDAISEN
Predicted secondary structure











SS confidence





































































Known secondary structure (DSSP) STTTSSS



GGG
SS
 .........3160.........3170.........3180.........3190.........3200.........3210.........3220
Sequence KIYGKTTMMSPRSLKKRVDELIESLTYTAYQTTRRGLFESHKLIVAAMLCLRVLLRSEELNSDEVDHLII
Predicted secondary structure

















SS confidence





































































Known secondary structure (DSSP)

S
S



S
TTTTTSS
 .........3230.........3240.........3250.........3260.........3270.........3280.........3290
Sequence GKVDVNPTPMPDALKSFLNDNIWAACKALETIHQFQGFCQSLETDVLQWKKWYSEEKAETADLPKAFKEL
Predicted secondary structure






































SS confidence





































































Known secondary structure (DSSP)



SS



S
TTT
TT

S

SS


SS

SSSS
S

SSSTT
 .........3300.........3310.........3320.........3330.........3340.........3350.........3360
Sequence SKFHRLLLLRALRPDRLPSALSQFVHDKMGERYIEQPPFNIFETFQETSKTVPIFFVLFPGVDPTPDVER
Predicted secondary structure




















SS confidence





































































Known secondary structure (DSSP)
S
GGGS
TTSSS






SSS

BTTB
S
 .........3370.........3380.........3390.........3400.........3410.........3420.........3430
Sequence VAATFDVSANNGRFINISMGQGQEDRAKKALFDCAQKGHWIMLQNVHLMQSWLYGLNGLEGFLESVFASP
Predicted secondary structure




















SS confidence





































































Known secondary structure (DSSP) T

TTSSS


TT
TTTT

SGGG
SSSSSSS
 .........3440.........3450.........3460.........3470.........3480.........3490.........3500
Sequence KTHPNFRVFISSEPPNVLLPLMQIIPESILQGSLKIANEAPQYLKANLRRAYNKFDQEFLDKCDKKPTEF
Predicted secondary structure

































SS confidence





































































Known secondary structure (DSSP)


SS




S
SS

S


S
S




STS
SS
SS
 .........3510.........3520.........3530.........3540.........3550.........3560.........3570
Sequence KSCLFALCFFHSLMLGRKKFGTQGWSRVYNFNDGDLTICADVLYNYLSKYDQVPWDDLRYIFGEIMYGGH
Predicted secondary structure























SS confidence





































































Known secondary structure (DSSP) GGGTTTT
SS




SSS

TTTGGG
 .........3580.........3590.........3600.........3610.........3620.........3630.........3640
Sequence ITDDWDRRTNRTYLKVLIRSELLQQNFNLAPQFKSPDPSKFDYEAYRKYIEEKLPIESPQMFGMHPNAEI
Predicted secondary structure






































SS confidence





































































Known secondary structure (DSSP)

STSS
SSSSS
TT


STT






T

 .........3650.........3660.........3670.........3680.........3690.........3700.........3710
Sequence GYLTQTCDQVFNTILEVQGGSSGGGASKKDDGVMVTLTDFKTRCPHDFNMLLIEEKVKEKTPYIVVCLQE
Predicted secondary structure





















SS confidence





































































Known secondary structure (DSSP)
S

SS
S




TT
S

 .........3720.........3730.........3740.........3750.........3760.........3770.........3780
Sequence CERMNGLLKEIKTSLEDLRLGLTGALNMTDAMESLQQSLSFNKVPDTWEKKAYFSKKPLSSWFADLIERN
Predicted secondary structure



















SS confidence





































































Known secondary structure (DSSP) SSS



T


TSS



S
 .........3790.........3800.........3810.........3820.........3830.........3840.........3850
Sequence IQLQEWCKELVTPTSLCISYLFNPMSYLTAIMQFTARAQGLPLDGITIQTNVTAMKGPEDVVNPAENGAY
Predicted secondary structure

























SS confidence





































































Known secondary structure (DSSP)



SGGGSSST

TTTS

SSTT

S

SSS
 .........3860.........3870.........3880.........3890.........3900.........3910.........3920
Sequence IHGLFLEGAAWEIGGQGQDGYLIEQKPKELHPKMPVINAVAVPLDKKKKNGQYDCPTYVTSARGQTFVFT
Predicted secondary structure









































SS confidence





































































Known secondary structure (DSSP)

B
SS



SSS
S




TT
SS
B

SSSS
TTT
SSSS
SS
B
S
 .........3930.........3940.......
Sequence ANLNMESDDSDPNKWILSGTCMLMSDD
Predicted secondary structure









SS confidence


























Known secondary structure (DSSP)

TT


ST

SS


Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


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Accessibility Statement
Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
© Structural Bioinformatics Group, Imperial College, London
Michael Sternberg 
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