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 Protein Homology/analogY Recognition Engine V 2.0


 

Fold library entry viewer: c8bt6A_

Fold library idPDB HeaderMoleculeTitle
c8bt6A_2.33PDB header: protein bindingChain: A: PDB Molecule: putative anonymous antigen-1;


Added to library: Sat Apr 8 13:33:09 2023
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence KRNPDAGVATAVQSVIQHQTFKRLLFGLRSLADFCSPSNQLYQENALDALDRGVLSAIQTAVTTFSDDDD
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Known secondary structure (DSSP)




TTTSSS


TSTTSTTTT
TTT
S
 .........80.........90.........100.........110.........120.........130.........140
Sequence LLCASRVLWASVAIKEEDPAHIARVHSEGSPVIVAVVNSSPTDPQTIEDSNFVDNLKRAGAPVDGASLAG
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Known secondary structure (DSSP)





TTTT





TT




 .........150.........160.........170.........180.........190.........200.........210
Sequence GLSIFTKTALDKTAKRVTAALAIAAETAEGSTALYNAGGTSVLLTYCLDQGDLSDAGVEVEGAFDTVRYA
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Known secondary structure (DSSP)

GGGG
SS


TSSS


SS



 .........220.........230.........240.........250.........260.........270.........280
Sequence GYQCTDATTLPQCIALDKYRGRKSASAKGSSALAAIGPEQLQKCLNTLKTAEAGSAEYDEALVTLGSSYI
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Known secondary structure (DSSP) TTS


TT

TTTT



S
TTS



 .........290.........300.........310.........320.........330.........340.........350
Sequence SSFTDEIVRAGGVPLLIELINSGLPQEGNPEKIASISGAAKLARIASNPVNVDAIVQAGGVATLCTAVSY
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Known secondary structure (DSSP) TTTT







TTT

STTTT
 .........360.........370.........380.........390.........400.........410.........420
Sequence CTESEALGALCALVPLASRESLAHEIVQYQTFATVLPILYQNVESPEIAALAELVATGSQHEEIQEHLQN
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Known secondary structure (DSSP)
TT




TSTTST

SS

TS


TT
 .........430.........440.........450.........460.........470.........480.........490
Sequence QAAEICSLCCQYHTADASYQQHAISALNRLVPRLTTLHGVSEYGGIQGVIASLNANVNNEQVALLAVQLL
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Known secondary structure (DSSP) TTTTTTTSTTT
SS

TTT
S
STTTTT
 .........500.........510.........520.........530.........540.........550.........560
Sequence DNFSEVSDAKTYSDGTCVDAVLAALEHEGNDLLISAGVHCLARIATEDDCARHLNVLDTAIQTARGNPDG
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Known secondary structure (DSSP) STTGGG


S

TTTT


TTTTTT
 .........570.........580.........590.........600.........610.........620.........630
Sequence VYRVLAAISGLSRVPSLRQIFEEKNASDTILAGISSWIECSRFEGQNRIIKAALKTVKNKISGDGDLTSC
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Known secondary structure (DSSP) TTSGGGTTTTSS


TT


SS
S

 .........640.........650.........660.........670.........680.........690.........700
Sequence FAACDVACLPQVKRVVELEEPDNNILVADTAAFRDLAATRITGAENLERCIESVLRVRKYPDSRRAQLNC
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Known secondary structure (DSSP)

TTTT
TTTS
SSSS



S



TT
 .........710.........720.........730.........740.........750.........760.........770
Sequence LETLNYLAQCDGGEGVAILSRTGGLNAVVQYLTRAPYLDAQIAGFTVLATSAKIDSNVGETLRKCNCLQA
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Known secondary structure (DSSP) TTTTTTT



TTTT
 .........780.........790.........800.........810.........820.........830.........840
Sequence LKVARTHAKSKELKRTIAPLVALLPTDALETEIQELLNECASACEKNNFPHLHENLAALNELLISSEGAK
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Known secondary structure (DSSP)

TTTT
S


SSTT
TS
 .........850.........860.........870.........880.........890.........900.........910
Sequence IAARLGIGAHCKYQEYISAHEQDALAVTDYDILGKDLFDATVSECAHAEQVASTRSGRNALIKAGNVATL
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Known secondary structure (DSSP) TTTTT



GGG


SSSSS
T


STTSTT
 .........920.........930.........940.........950.........960.........970.........980
Sequence ISLYESLKAPQSQYSEEAAIHCLEALRILLKSDKRSAELAFERNFVSTLCVGIDSFPHSAPVLGATCACL
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Known secondary structure (DSSP)


SS

TTTSTTSTT
 .........990.........1000.........1010.........1020.........1030.........1040.........1050
Sequence AAATTPERVQLTAQPAFESLLQKLVFVIQNDPSKDNKLVARALQELVEITNDATANKIAEAGAVTALFRI
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Known secondary structure (DSSP)


S

TTS









TT
 .........1060.........1070.........1080.........1090.........1100.........1110.........1120
Sequence IDEYGDDEQLTVQAAEVLALLGAFEDLRRFYDNDVRFPAQVLTAALTKQKNNETAVVHLLDVLNKLATSE
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Known secondary structure (DSSP) STT
TTTS
GGGGGTT
TTTT


GG
 .........1130.........1140.........1150.........1160.........1170.........1180.........1190
Sequence DRAVLRELGVEQVADARVHSESEAVTRLGGELFAKGADEQIKSLLQIIETVESGAEDTAQTVDILCGRLA
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Known secondary structure (DSSP) GTT



TTTT


TT

T
TT
 .........1200.........1210.........1220.........1230.........1240.........1250.........1260
Sequence VFLAAPLEDPRDALQHTEKCLGSLVATLQTYPGSERLEGNVALVCRRLCDRCFDDADDPYGAWAVAASGL
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Known secondary structure (DSSP) TTS

S
TTTSTT
TTSS
TT
SSST

 .........1270.........1280.........1290.........1300.........1310.........1320.........1330
Sequence AQFAGVAGETVLANKKFLGPAYRTFTACCANAYCPTVEVAPSFLPQTYTLLEHKNDAETVARVLEFLRYF
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Known secondary structure (DSSP)

TTSSSTT
STT




SGGGT

TT
 .........1340.........1350.........1360.........1370.........1380.........1390.........1400
Sequence AEDPTACGLIVQNSGSSGDVVALTVLLQQHQNNDAVVCAGEFLGALAYTLSQAGYEPLPTLADGSVLRDC
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Known secondary structure (DSSP) TTS

BTTBS

TTTT


TT



TS
 .........1410.........1420.........1430.........1440.........1450.........1460.........1470
Sequence DALGSNSSSARQLAHHIEKLLSKAYNDALIQEQALKKLTSLKAEDDKKRFSDEERAGLYAAACVLLAAGG
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Known secondary structure (DSSP)

TT







TT
S
TT

T
S


 .........1480.........1490.........1500.........1510.........1520.........1530.........1540
Sequence AGLTGEEKFNGFEVVLQAIEEFGENPTVIKEVNRALQGLSADVNTARTVKEAVPKLCTEATTAIQTDAEC
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Known secondary structure (DSSP) T
S



S
STT






TT
 .........1550.........1560.........1570.........1580.........1590.........1600.........1610
Sequence ADTFCDLLQLVSQEGNGRQLLQVYGLEETLQGVENLAAYYGEDFGTQLSEKVAIRQAEDDQPREKTCKDV
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Known secondary structure (DSSP)

TTTTSTTTSTT
S





TT





 .........1620.........1630.........1640.........1650.........1660.........1670.........1680
Sequence YDLLNSRVQQGLSVAISEVAILQEEVEFLVSQGYNQEQLDHQTAGADHQYGNAFELLAATSANVKLLQAN
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Known secondary structure (DSSP) T



TTT
TT


TTS


TT




TSSTTT
 .........1690.........1700.........1710.........1720.........1730.........1740.........1750
Sequence EFSKELALIKGQADPEIVLYAVKALTAFCKFPPAAQDTARIQGCPALVTEACSKINKSGLPNERKEEHLC
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Known secondary structure (DSSP) TS





TTSSTTS


 .........1760.........1770.........1780.........1790.........1800.........1810.........1820
Sequence ARYFLVERTAINRNLYNKTPITELINSWNDYDKGAYTTTLLRFVFRARRVVSDAHVEELLKANVLQRLIG
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Known secondary structure (DSSP)

STTTTSSS


SSS



S

TTTTT
 .........1830.........1840.........1850.........1860.........1870.........1880.........1890
Sequence IISDVNADALLPDVLFLLGSLAVVPEIKTKIGELNGIAACTDLLQRALPKPNTAPVVTNVCLAFANICIG
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Known secondary structure (DSSP)
TT



TTSTTTTSTT
TT
 .........1900.........1910.........1920.........1930.........1940.........1950.........1960
Sequence HKKNTEIFSKLGGPALNVKVLNDRGHEYDVCNAASVLLCNLLYKNESKKLLGTNGAPAALVKGLSNYDGS
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Known secondary structure (DSSP)
TTTTTTSTT



TTT
SS
 .........1970.........1980.........1990.........2000.........2010.........2020.........2030
Sequence EEKTAIRCLESVFKAISNLSLYTPNIQPFLDAGIENAYSTWLSNLSETFPDAQLETGCRTLVNLVENEEN
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Known secondary structure (DSSP)

TSGGGTTTT

TTS




S
 .........2040.........2050.........2060.........2070.........2080.........2090.........2100
Sequence NRKFGVCLLPCAVAKQGRTDTKALLLLLDIEASLCRLKENAEAFAANGGIETTIRLIHQFDYDVGLLTLG
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Known secondary structure (DSSP)


GGGGTTT

TTTS



STTSTTTTTT
 .........2110.........2120.........2130.........2140.........2150.........2160.........2170
Sequence IHLLGIQSAVKDSIQRDADVFSILVGCVEVDAEGNEVTDLVVGGLRCTRRIVRSEELAFEYCNAGGIATI
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Known secondary structure (DSSP) TTSTTTTT



TT


SSS




STT
 .........2180.........2190.........2200.........2210.........2220.........2230.........2240
Sequence ANVICKSINQPVLEACRVLLGLLFYTTRSQADRQAAVEALHAQCQQRAEQHAQAQADYEAGVVSEPPPEE
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Known secondary structure (DSSP) T
TT



T




TS

S




 .........2250.........2260.........2270.........2280.........2290.........2300.........2310
Sequence EVPEPDPDELANAAYGGWYQGDEVIDAILQAVCACAAVEAHAKQLRLQRVCLGLAAYFASEQGTSSLVGS
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Known secondary structure (DSSP)







TTT





TSGGGTT
T

T
 .........2320.........2330.........2340.........2350.........2360.........2370.........2380
Sequence GIEQVLTQITNFAGEGTTQLSCVIINSIATSGDYEEIKTSALLSALKTSVGKATKKPEEKALKETCAATL
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Known secondary structure (DSSP) T

TTTT
S








TTT




SS
 .........2390.........2400.........2410.........2420.........2430.........2440.........2450
Sequence EAASSGEDPFDAFSKTVTELDFKFTEWNVDPYPNGVHDLPSNVKEALRKGGKLKVFLPEKEKEEIRWRSS
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Known secondary structure (DSSP)
SS
GGGS

S

GGGGTTT

S
SS
GGGS


TTS

 .........2460.........2470.........2480.........2490.........2500.........2510.........2520
Sequence QDLNVFEWCGNDQDYNNRIPIVRIRNVAKGLVHPALKAAAKKEPRKVAAKFTCLFGPPNDDFPEGVELPV
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Known secondary structure (DSSP) TTSS




S

GGG



SS
STSTTTS
TTT





SS
SS



 .........2530.........2540...
Sequence AKSQKERDAFVEVQWRDAATYNF
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Known secondary structure (DSSP)
SS

TT


Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


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Accessibility Statement
Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
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