Standard Mode | Switch to Expert Mode | Login to view past jobsRetrieve Phyre Job Id
 
Subscribe to Phyre at Google Groups
Email:
Visit Phyre at Google Groups
 Protein Homology/analogY Recognition Engine V 2.0


 

Fold library entry viewer: c8bpcA_

Fold library idPDB HeaderMoleculeTitle
c8bpcA_2.80PDB header: gene regulationChain: A: PDB Molecule: isoform 2 of paired amphipathic helix protein sin3b;


Added to library: Sat May 13 09:19:21 2023
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence TLQEFSFFDKVRRVLKSQEVYENFLRCIALFNQELVSGSELLQLVSPFLGKFPELFAQFKSFLGCKRIGS
Predicted secondary structure



















SS confidence





































































Known secondary structure (DSSP)

SSTTTS
TTTSSS



TT
 .........80.........90.........100.........110.........120.........130.........140
Sequence SYRALPKTYQQPKCSGRTAICKEVLNDTWVSFPSWSEDSTFVSSKKTPYEEQLHRCEDERFELDVVLETN
Predicted secondary structure





































SS confidence





































































Known secondary structure (DSSP) T

TT





S


S

S


S





TTGGG

 .........150.........160.........170.........180.........190.........200.........210
Sequence LATIRVLESVQKKLSRMAPEDQEKFRLDDSLGGTSEVIQRRAIYRIYGDKAPEIIESLKKNPVTAVPVVL
Predicted secondary structure




















SS confidence





































































Known secondary structure (DSSP) TTS
TT



TTTTSS
SSGGG
 .........220.........230.........240.........250.........260.........270.........280
Sequence KRLKAKEEEWREAQQGFNKIWREQYEKAYLKSLDHQAVNFKQNDTKALRSKSLLNEIESVYDEHQEQHSE
Predicted secondary structure
















SS confidence





































































Known secondary structure (DSSP) TTT

STS
 .........290.........300.........310.........320.........330.........340.........350
Sequence GRSAPSSEPHLIFVYEDRQILEDAAALISYYVKRQPAIQKEDQGTIHQLLHQFVPSLFFSQDDVYSLFFA
Predicted secondary structure

























SS confidence





































































Known secondary structure (DSSP) T
S

TT

S

T
SSS
TTT



 .........360.........370.........380.........390.........400.........410.........420
Sequence NNNWYFFLRLHQTLCSRLLKIYRQAQKQLLEYRTEKEREKLLCEGRRELRLKQPSEVELEEYYPAFLDMV
Predicted secondary structure


















SS confidence





































































Known secondary structure (DSSP)
S

GGG








 .........430.........440.........450.........460.........470.........480.........490
Sequence RSLLEGSIDPTQYEDTLREMFTIHAYVGFTMDKLVQNIARQLHHLVSDDVCLKVVELYLNEKKRGAAGGN
Predicted secondary structure


















SS confidence





































































Known secondary structure (DSSP) T
S
GGGGGGGTT
T
SS
 .........500.........510.........520.........530......
Sequence LSSRCVRAARETSYQWKAERCMADENCFKVMFLQRKGQVIMTIELL
Predicted secondary structure















SS confidence













































Known secondary structure (DSSP) STTSTTS

TT


Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


Phyre is now FREE for commercial users!

All images and data generated by Phyre2 are free to use in any publication with acknowledgement

Accessibility Statement
Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
© Structural Bioinformatics Group, Imperial College, London
Michael Sternberg 
Disclaimer
Terms and Conditions
Structural Biology Group logo Imperial logo
BBSRC logo
Phyre2 is part of Genome3D