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 Protein Homology/analogY Recognition Engine V 2.0


 

Fold library entry viewer: c8bnrB_

Fold library idPDB HeaderMoleculeTitle
c8bnrB_10.30PDB header: membrane proteinChain: B: PDB Molecule: 3-ketoacyl-coa thiolase fadi;


Added to library: Sat May 20 09:36:40 2023
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence MGQVLPLVTRQGDRIAIVSGLRTPFARQATAFHGIPAVDLGKMVVGELLARSEIPAEVIEQLVFGQVVQM
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Known secondary structure (DSSP)






B
TTS
B


SSSSS
S

T

TTT




SS

 .........80.........90.........100.........110.........120.........130.........140
Sequence PEAPNIAREIVLGTGMNVHTDAYSVSRACATSFQAVANVAESLMAGTIRAGIAGGADSSSVLPIGVSKKL
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Known secondary structure (DSSP) TT
SSSSS
S
S






GGGSSS
S
TT






 .........150.........160.........170.........180.........190.........200.........210
Sequence ARVLVDVNKARTMSQRLKLFSRLRLRDLMPVPPAVAEYSTGLRMGDTAEQMAKTYGITREQQDALAHRSH
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Known secondary structure (DSSP)


TTS

TTTTS





S
TTT


TT

 .........220.........230.........240.........250.........260.........270.........280
Sequence QRAAQAWSDGKLKEEVMTAFIPPYKQPLVEDNNIRGNSSLADYAKLRPAFDRKHGTVTAANSTPLTDGAA
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Known secondary structure (DSSP) T
TTTTB

B

TT
S

B
S
SS


S

TS

SS
TTT



STTB

B
 .........290.........300.........310.........320.........330.........340.........350
Sequence AVILMTESRAKELGLVPLGYLRSYAFTAIDVWQDMLLGPAWSTPLALERAGLTMSDLTLIDMHEAFAAQT
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Known secondary structure (DSSP) TT


SSBB




SSS
TT
T

SSS
S
B

SB
 .........360.........370.........380.........390.........400.........410.........420
Sequence LANIQLLGSERFAREALGRAHATGEVDDSKFNVLGGSIAYGHPFAATGARMITQTLHELRRRGGGFGLVT
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Known secondary structure (DSSP)
TT

SS





TTTBTTT


B
GGGS
S


 .........430......
Sequence ACAAGGLGAAMVLEAE
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Known secondary structure (DSSP) TTTB



Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


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Accessibility Statement
Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
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