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 Protein Homology/analogY Recognition Engine V 2.0


 

Fold library entry viewer: c8bmwM_

Fold library idPDB HeaderMoleculeTitle
c8bmwM_3.50PDB header: rna binding proteinChain: M: PDB Molecule: crispr-associated protein cas5 (type iii-d);


Added to library: Sat Mar 4 09:50:26 2023
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence ILIKLKVKGYITTQMRRIRNYYFSITNYIPSTTLRGAILAEYYNQTGKIDENFYVSPAYPIKTAPAHYFS
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Known secondary structure (DSSP)





SB

BTTB

B

SS

T



SS

B


TT

TTS
 .........80.........90.........100.........110.........120.........130.........140
Sequence PAKERKGDEFIEVKRILEKKEKEFEANKPIEEIMKLEIDGKHPKPKIGSLITYEGETDKENKYREFSSKS
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Known secondary structure (DSSP)
BSSSSS


BTTSSSTTTTT

S


SSSS

B

SS


TTB



 .........150.........160.........170.........180.........190.........200.........210
Sequence IIQMHVAIDSYKGMLFAYEYKEFDEMWAIASDSEVIDTVKRIKIGRGKNRGNKVVDVEKVREVSLDQSKG
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Known secondary structure (DSSP)







B
SS





SS
SSSS






S






S
 .........220.........230.........240.........250.........260.........270.........280
Sequence LLYCLSPCIGSLFGKTFFKAKYIIGDKSIYSGWFTVDSFSGQKPVFETLREGSLVYVESFSNEKSLMPAG
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Known secondary structure (DSSP)
S


STT
S





SSS




TT


S

STTTT
 .........290....
Sequence LNFMLRISDLSSIL
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Known secondary structure (DSSP)




SSGGGG


Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


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Accessibility Statement
Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
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Michael Sternberg 
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