PHYRE Protein Fold Recognition Server

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Protein Homology/analogY Recognition Engine V 2.2

Fold library entry viewer: c8bmwL_

Fold library id	PDB Header	Molecule	Title
c8bmwL_	3.50	PDB header: rna binding protein	Chain: L: PDB Molecule: crispr-associated cas7 paralog (type iii-d);

Links to external resources
Added to library: Sat Mar 4 09:53:01 2023

1 . . . . . . . . 10 . . . . . . . . . 20 . . . . . . . . . 30 . . . . . . . . . 40 . . . . . . . . . 50 . . . . . . . . . 60 . . . . . . . . . 70

Sequence I P I K V S M R N L S S L T I A G G S T I S S I D I P L N P L G V P P S T I K G T M R T A V H N L L P N G Y T S C G E V E P E S I R E A H K

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)
S S
S S
S S S
S S S S
S
S S
S T T

. . . . . . . . . 80 . . . . . . . . . 90 . . . . . . . . . 100 . . . . . . . . . 110 . . . . . . . . . 120 . . . . . . . . . 130 . . . . . . . . . 140

Sequence N G V C D V C K L F G Y P D S L T G C F T I D V S K T D Y R T S Y I T R V S I D D K T Q R A K E G S L F T Q Q I I L P N S D I S F T V Y Y N

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) T
S S S
S
S
B
S S S S S B
T T
S S

. . . . . . . . . 150 . . . . . . . . . 160 . . . . . . . . . 170 . . . . . . . . . 180 . . . . . . . . . 190 . . . . . . . . . 200 .

Sequence C N D E R L F K L L L Y S I L D L R Y W R L G R N T M I D V K V N N V E E I C K S V K C D E E I N G I L N Q L S R Y L W E

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) S
T S
S T T
S S
S
T T

Download: PDB structure FASTA sequence
Hidden Markov model

Image coloured by rainbow N → C terminus

Interactive 3D view in JSmol

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Accessibility Statement

Please cite: Phyre2.2: A Community Resource for Template-based Protein Structure Prediction

Powell HR et al. Journal of Molecular Biology (2025) in press DOI: https://doi.org/10.1016/j.jmb.2025.168960

© Structural Bioinformatics Group, Imperial College, London

Michael Sternberg

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	1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70
Sequence	I	P	I	K	V	S	M	R	N	L	S	S	L	T	I	A	G	G	S	T	I	S	S	I	D	I	P	L	N	P	L	G	V	P	P	S	T	I	K	G	T	M	R	T	A	V	H	N	L	L	P	N	G	Y	T	S	C	G	E	V	E	P	E	S	I	R	E	A	H	K
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)										S	S									S	S			S	S	S				S	S	S	S																S			S	S								S								T	T
	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140
Sequence	N	G	V	C	D	V	C	K	L	F	G	Y	P	D	S	L	T	G	C	F	T	I	D	V	S	K	T	D	Y	R	T	S	Y	I	T	R	V	S	I	D	D	K	T	Q	R	A	K	E	G	S	L	F	T	Q	Q	I	I	L	P	N	S	D	I	S	F	T	V	Y	Y	N
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	T												S	S	S		S		S																				B		S	S	S	S	S	B		T	T										S	S
	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.
Sequence	C	N	D	E	R	L	F	K	L	L	L	Y	S	I	L	D	L	R	Y	W	R	L	G	R	N	T	M	I	D	V	K	V	N	N	V	E	E	I	C	K	S	V	K	C	D	E	E	I	N	G	I	L	N	Q	L	S	R	Y	L	W	E
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	S																		T	S			S	T	T										S							S															S		T	T