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 Protein Homology/analogY Recognition Engine V 2.0


 

Fold library entry viewer: c8bd6A_

Fold library idPDB HeaderMoleculeTitle
c8bd6A_4.10PDB header: rna binding proteinChain: A: PDB Molecule: cas12k;


Added to library: Sat Dec 31 10:50:56 2022
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence ASQITIQARLISFESNRQQLWKLMADLNTPLINELLCQLGQHPDFEKWQQKGKLPSTVVSQLCQPLKTDP
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Known secondary structure (DSSP)



TTS
TTSS


TTTTTST
 .........80.........90.........100.........110.........120.........130.........140
Sequence RFAGQPSRLYMSAIHIVDYIYKSWLAIQKRLQQQLDGKTRWLEMLNSDAELVELSGDTLEAIRVKAAEIL
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Known secondary structure (DSSP) TS
S




T


 .........150.........160.........170.........180.........190.........200.........210
Sequence AILSKTLFDAYQETEDIKSRSAISYLLKNGCKLTDKEEDSEKFAKRRRQVEIQIQRLTEKLSLPFPLVFE
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Known secondary structure (DSSP) T

T

STTSS

S



TT







B
 .........220.........230.........240.........250.........260.........270.........280
Sequence TNEDMVWSKNQKGRLCVHFNGLSDLIFEVYCGNRQLHWFQRFLEDQQTKRKSKNQHSSGLFTLRNGHLVW
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Known secondary structure (DSSP) SGGG
TTS
TT

TTS
S
TTSSS
 .........290.........300.........310.........320.........330.........340.........350
Sequence LEGEGKGEPWNLHHLTLYCCVDNRLWTEEGTEIVRQEKADEITKFITNMKKKSDLSDTQQALIQRKQSTL
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Known secondary structure (DSSP)


SS
S
S
GGGSSS




 .........360.........370.........380.........390.........400.........410.........420
Sequence TRINNSFERPSQPLYQGQSHILVGVSLGLEKPATVAVVDAIANKVLAYRSIKQLLGDNYELLNRQRRQQQ
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Known secondary structure (DSSP) TS












TTS
SSSS
SSS


STT
 .........430.........440.........450.........460.........470.........480.........490
Sequence YLSHERHKAQKNFSPNQFGASELGQHIDRLLAKAIVALARTYKAGSIVLPKLGDMREVVQSEIQAIAEQK
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Known secondary structure (DSSP)
SS
S
TTTT

STT
S
GGGGS
 .........500.........510.........520.........530.........540.........550.........560
Sequence FPGYIEGQQKYAKQYRVNVHRWSYGRLIQSIQSKAAQTGIVIEEGKQPIRGSPHDKAKELALSAYNLRLT
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Known secondary structure (DSSP) SSS
S



TTT



SSS


Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


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Accessibility Statement
Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
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