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 Protein Homology/analogY Recognition Engine V 2.0


 

Fold library entry viewer: c8bbgD_

Fold library idPDB HeaderMoleculeTitle
c8bbgD_3.50PDB header: transport proteinChain: D: PDB Molecule: snap-tag,tetratricopeptide repeat protein 21b;


Added to library: Sat Dec 24 12:30:41 2022
 
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 1........10.........20.........30.........40.........50.........60.........70
Sequence MDSQELKTLINYYCQERYFHHVLLVASEGIKRYGSDPVFRFYHAYGTLMEGKTQEALREFEAIKNKQDVS
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Known secondary structure (DSSP)

TT
STT
T
TTTTSTTT
 .........80.........90.........100.........110.........120.........130.........140
Sequence LCSLLALIYAHKMSPNPDREAILESDARVKEQRKGAGEKALYHAGLFLWHIGRHDKAREYIDRMIKISDG
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Known secondary structure (DSSP) SSS



T
TS
 .........150.........160.........170.........180.........190.........200.........210
Sequence SKQGHVLKAWLDITRGKEPYTKKALKYFEEGLQDGNDTFALLGKAQCLEMRQNYSGALETVNQIIVNFPS
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Known secondary structure (DSSP)
T

STT


TT

TT
 .........220.........230.........240.........250.........260.........270.........280
Sequence FLPAFVKKMKLQLALQDWDQTVETAQRLLLQDSQNVEALRMQALYYVCREGDIEKASTKLENLGNTLDAM
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Known secondary structure (DSSP)
TT
TT
TT
TT

S
 .........290.........300.........310.........320.........330.........340.........350
Sequence EPQNAQLFYNITLAFSRTCGRSQLILQKIQTLLERAFSLNPQQSEFATELGYQMILQGRVKEALKWYKTA
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Known secondary structure (DSSP)
TT
STT

TT
TT
 .........360.........370.........380.........390.........400.........410.........420
Sequence MTLDETSVSALVGFIQCQLIEGQLQDADQQLEFLNEIQQSIGKSAELIYLHAVLAMKKNKRQEEVINLLN
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Known secondary structure (DSSP)
TT
T
GGGT


TT

 .........430.........440.........450.........460.........470.........480.........490
Sequence DVLDTHFSQLEGLPLGIQYFEKLNPDFLLEIVMEYLSFCPMQPASPGQPLCPLLRRCISVLETVVRTVPG
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Known secondary structure (DSSP) STT

SS
S
SS


S

TT
TT
 .........500.........510.........520.........530.........540.........550.........560
Sequence LLQTVFLIAKVKYLSGDIEAAFNNLQHCLEHNPSYADAHLLLAQVYLSQEKVKLCSQSLELCLSYDFKVR
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Known secondary structure (DSSP) STTT

TT
TT

GGGG
 .........570.........580.........590.........600.........610.........620.........630
Sequence DYPLYHLIKAQSQKKMGEIADAIKTLHMAMSLPGMKRIGASTKSKDRKTEVDTSHRLSIFLELIDVHRLN
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Known secondary structure (DSSP) G
TT
STTSS


SS
S

S





T
 .........640.........650.........660.........670.........680.........690.........700
Sequence GEQHEATKVLQDAIHEFSGTSEEVRVTIANADLALAQGDIERALSILQNVTAEQPYFIEAREKMADIYLK
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Known secondary structure (DSSP) T
TTTSTTT
T

TTSTT
 .........710.........720.........730.........740.........750.........760.........770
Sequence HRKDKMLYITCFREIAERMANPRSFLLLGDAYMNILEPEEAIVAYEQALNQNPKDGTLASKMGKALIKTH
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Known secondary structure (DSSP) TS




TT
TT
TT
TT
 .........780.........790.........800.........810.........820.........830.........840
Sequence NYSMAITYYEAALKTGQKNYLCYDLAELLLKLKWYDKAEKVLQHALAHEPVNELSALMEDGRCQVLLAKV
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Known secondary structure (DSSP)
TT

TTTT
TT
S



S
 .........850.........860.........870.........880.........890.........900.........910
Sequence YSKMEKLGDAITALQQARELQARVLKRVQMEQPDAVPAQKHLAAEICAEIAKHSVAQRDYEKAIKFYREA
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Known secondary structure (DSSP) TT

GGGTT
 .........920.........930.........940.........950.........960.........970.........980
Sequence LVHCETDNKIMLELARLYLAQDDPDSCLRQCALLLQSDQDNEAATMMMADLMFRKQDYEQAVFHLQQLLE
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Known secondary structure (DSSP)
TT
TT

TT
TT
 .........990.........1000.........1010.........1020.........1030.........1040.........1050
Sequence RKPDNYMTLSRLIDLLRRCGKLEDVPRFFSMAEKRNSRAKLEPGFQYCKGLYLWYTGEPNDALRHFNKAR
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Known secondary structure (DSSP)
SS
T
GGGT
TTGGGST
T
 .........1060.........1070.........1080.........1090.........1100.........1110.........1120
Sequence KDRDWGQNALYNMIEICLNPDNETVGGEVFENLDGDLGNSTEKQESVQLAVRTAEKLLKELKPQTVQGHV
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Known secondary structure (DSSP) TSTT
TT


TT
TS
TS


SS
 .........1130.........1140.........1150.........1160.........1170.........1180.........1190
Sequence QLRIMENYCLMATKQKSNVEQALNTFTEIAASEKEHIPALLGMATAYMILKQTPRARNQLKRIAKMNWNA
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Known secondary structure (DSSP) T


TT
TT
TS


T
 .........1200.........1210.........1220.........1230.........1240.........1250.........1260
Sequence IDAEEFEKSWLLLADIYIQSAKYDMAEDLLKRCLRHNRSCCKAYEYMGYIMEKEQAYTDAALNYEMAWKY
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Known secondary structure (DSSP) TTTT

TT
TT
 .........1270.........1280.........1290.........1300.........1310......
Sequence SNRTNPAVGYKLAFNYLKAKRYVDSIDICHQVLEAHPTYPKIRKDILDKARASLRP
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Known secondary structure (DSSP) TTT

TT
STT
SS


Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


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Accessibility Statement
Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
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