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 Protein Homology/analogY Recognition Engine V 2.0


 

Fold library entry viewer: c8bbfC_

Fold library idPDB HeaderMoleculeTitle
c8bbfC_8.00PDB header: transport proteinChain: C: PDB Molecule: intraflagellar transport protein 122 homolog;


Added to library: Sat Dec 10 09:18:27 2022
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence KAEREPLLLCATYLKKLDSPGYAAETYLKMGDLKSLVQLHVETQRWDEAFALGEKHPEFKDDIYMPYAQW
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Known secondary structure (DSSP)


TT
T
TT

GGG
 .........80.........90.........100.........110.........120.........130.........140
Sequence LAENFEEAQKAFHKAGRQREAVQVLEQLTNNAVAESRFNDAAYYYWMLSMQCLDIAQDPAQKDTMLGKFY
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Known secondary structure (DSSP)

TT
TT
TTSGGG
 .........150.........160.........170.........180.........190.........200.........210
Sequence HFQRLAELYHGYHAIHRHTEDPFSVHRPETLFNISRFLLHSLPKDTPSGISKVKILFTLAKQSKALGAYR
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Known secondary structure (DSSP) SSS
SS


SS

TT

TB
 .........220.........230.........240.........250.........260.........270.........280
Sequence LARHAYDKLRGLYIPARFQKSIELGTLTIRAKPFHDSEELVPLCYRCSTNNPLLNNLGNVCINCRQPFIF
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Known secondary structure (DSSP) TTS


TTS
S
B
GGGS
B
TTT

B

SS
SSTTB
TTT

B

B
 .........290.........300.........310.........320.........330.........340.........350
Sequence SASSYDVLHLVEFYLEEGITDEEAISLIDLEVLFVPVVVSRLVLRSMSRRDVLIKRWPPPLRWQYFRSLL
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Known secondary structure (DSSP)
TTT

B
S
TT

S






S
TTT


TTS

S
 .........360.........370.........380.........390..
Sequence PDASITMCPSCFQMFHSEDYELLVLQHGCCPYCRRCKDDPGP
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Known secondary structure (DSSP) TTS

TTT

SS
TTT


TT




Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


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Accessibility Statement
Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
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Michael Sternberg 
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