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 Protein Homology/analogY Recognition Engine V 2.0


 

Fold library entry viewer: c8bbfB_

Fold library idPDB HeaderMoleculeTitle
c8bbfB_8.00PDB header: transport proteinChain: B: PDB Molecule: intraflagellar transport protein 140 homolog;


Added to library: Sat Dec 10 11:47:07 2022
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence MALYYDHQIEAPDAAGSPSFISWHPVHPFLAVAYISTTSTGSVDIYLEQGECVPDTHVERPFRVASLCWH
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Known secondary structure (DSSP)




TT


SSSS

TT


TTS
B
TT

SS

 .........80.........90.........100.........110.........120.........130.........140
Sequence PTRLVLAVGWETGEVTVFNKQDKEQHTMPLTHTADITVLRWSPSGNCLLSGDRLGVLLLWRLDQRGRVQG
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Known secondary structure (DSSP) SSSSTTS
TTTT

S


S



TTSS
TT
B
TTS
B
S
 .........150.........160.........170.........180.........190.........200.........210
Sequence TPLLKHEYGKHLTHCIFRLPPPGMGSHEGLLFFVSLMDGTVHYVDEKGKTTQVVSADSTIQMLFYMEKRE
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Known secondary structure (DSSP) S
S
SS














TTS
TT


SS
GGGT
 .........220.........230.........240.........250.........260.........270.........280
Sequence ALVVVTENLRLSLYTVPPEGKAEEVMKVKLSGKTGRRADIALIEGSLLVMAVGEAALRFWDIERGENYIL
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Known secondary structure (DSSP) TT


TTS



S
SSS

TTT
SSSSTTTT
 .........290.........300.........310.........320.........330.........340.........350
Sequence SPDEKFGFEKGENMNCVCYCKVKGLLAAGTDRGRVAMWRKVPDFLGSPGAEGKDRWALQTPTELQGNITQ
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Known secondary structure (DSSP)


GGGT

TT

TTTTTTS



TTS



GGGG



SS
 .........360.........370.........380.........390.........400.........410.........420
Sequence IQWGSRKNLLAVNSVISVAILSERAMSSHFHQQVAAMQVSPSLLNVCFLSTGVAHSLRTDMHISGVFATK
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Known secondary structure (DSSP)

STT

SS


TTTTTTTT
SS

S
S
 .........430.........440.........450.........460.........470.........480.........490
Sequence DAVAVWNGRQVAIFELSGAAIRSAGTFLCETPVLAMHEENVYTVESNRVQVRTWQGTVKQLLLFSETEGN
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Known secondary structure (DSSP) S
SSTT


S
TTTT
TT



TTT

 .........500.........510.........520.........530.........540.........550.........560
Sequence PCFLDICGNFLVVGTDLAHFKSFDLSRREAKAHCSCRSLAELVPGVGGIASLRCSSSGSTISILPSKADN
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Known secondary structure (DSSP) TTTTS
SSSS
STT


TTSS
TTS
 .........570.........580.........590.........600.........610.........620.........630
Sequence SPDSKICFYDVEMDTVTVFDFKTGQIDRRETLSFNEQETNKSHLFVDEGLKNYVPVNHFWDQSEPRLFVC
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Known secondary structure (DSSP)
B
STTTTTTT


SSSS







GGGGG
SS
TT
 .........640.........650.........660.........670.........680.........690.........700
Sequence EAVQETAGPAADVLILSFFISEEHGFLLHESFPRPATSHSLLGMEVPYYYFTRKPEEADREDEVEPGCHH
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Known secondary structure (DSSP)






STTT

TTTT
TTTTTTT



TT


 .........710.........720.........730.........740.........750.........760.........770
Sequence IPQMVSRRPLRDFVGLEDCDKATRDAMLHFSFFVTIGDMDEAFKSIKLIKSEAVWENMARMCVKTQRLDV
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Known secondary structure (DSSP)




GGGTT
TT

T
TT


T
 .........780.........790.........800.........810.........820.........830.........840
Sequence AKVCLGNMGHARGARALREAEQEPELEARVAVLATQLGMLEDAEQLYRKCKRHDLLNKFYQAAGRWQEAL
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Known secondary structure (DSSP) TT
TTSS
T
T
TT
 .........850.........860.........870.........880.........890.........900.........910
Sequence QVAEHHDRVHLRSTYHRYAGHLEASADCSRALSYYEKSDTHRFEVPRMLSEDLPSLELYVNKMKDKTLWR
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Known secondary structure (DSSP) T
GGGTT
TT
TTT


 .........920.........930.........940.........950.........960.........970.........980
Sequence WWAQYLESQGEMDAALHYYELARDHFSLVRIHCFQGNVQKAAQIANETGNLAASYHLARQYESQEEVGQA
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Known secondary structure (DSSP) TT
TT
T


TT
 .........990.........1000.........1010.........1020.........1030.........1040.........1050
Sequence VHFYTRAQAFKNAIRLCKENGLDDQLMNLALLSSPEDMIEAARYYEEKGVQMDRAVMLYHKAGHFSKALE
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Known secondary structure (DSSP) TT
T
S

S
TT
 .........1060.........1070.........1080.........1090.........
Sequence LAFATQQFVALQLIAEDLDETSDPALLARCSDFFIEHSQYERAVELLLA
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Known secondary structure (DSSP) TT
T

TTS
TT


Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


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Accessibility Statement
Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
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