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 Protein Homology/analogY Recognition Engine V 2.0


 

Fold library entry viewer: c8bbfA_

Fold library idPDB HeaderMoleculeTitle
c8bbfA_8.00PDB header: transport proteinChain: A: PDB Molecule: wd repeat-containing protein 19;


Added to library: Sat Dec 10 10:06:36 2022
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence MKRIFSLLEKTWLGAPIQFAWQKTSGNYLAVTGADYIVKIFDRHGQKRSEINLPGNCVAMDWDKDGDVLA
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Known secondary structure (DSSP)


TTTTTS



TTSTT

TTS
SSS



SS

TTSS
 .........80.........90.........100.........110.........120.........130.........140
Sequence VIAEKSSCIYLWDANTNKTSQLDNGMRDQMSFLLWSKVGSFLAVGTVKGNLLIYNHQTSRKIPVLGKHTK
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Known secondary structure (DSSP) TT
STTTT
SS
S

SSSSTTS
TTT

TTSSSS
 .........150.........160.........170.........180.........190.........200.........210
Sequence RITCGCWNAENLLALGGEDKMITVSNQEGDTIRQTQVRSEPSNMQFFLMKMDDRTSAAESMISVVLGKKT
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Known secondary structure (DSSP)

TTS
TTT
TT


SS




SSTT

S

TTT
 .........220.........230.........240.........250.........260.........270.........280
Sequence LFFLNLNEPDNPADLEFQQDFGNIVCYNWYGDGRIMIGFSCGHFVVISTHTGELGQEIFQARNHKDNLTS
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Known secondary structure (DSSP) SS
TTS


GGG
STTTSSS
STT
TT


SS
 .........290.........300.........310.........320.........330.........340.........350
Sequence IAVSQTLNKVATCGDNCIKIQDLVDLKDMYVILNLDEENKGLGTLSWTDDGQLLALSTQRGSLHVFLTKL
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Known secondary structure (DSSP) TTTTTTTT

GGG
S
TTSSTTS
S

 .........360.........370.........380.........390.........400.........410.........420
Sequence PILGDACSTRIAYLTSLLEVTVANPVEGELPITVSVDVEPNFVAVGLYHLAVGMNNRAWFYVLGENAVKK
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Known secondary structure (DSSP)


TTTTTTTT
SS

S
SSTT
SS
 .........430.........440.........450.........460.........470.........480.........490
Sequence LKDMEYLGTVASICLHSDYAAALFEGKVQLHLIESEILDAQEERETRLFPAVDDKCRILCHALTSDFLIY
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Known secondary structure (DSSP)
SS
TTTTSS

STT

STT

S


SS
 .........500.........510.........520.........530.........540.........550.........560
Sequence GTDTGVVQYFYIEDWQFVNDYRHPVSVKKIFPDPNGTRLVFIDEKSDGFVYCPVNDATYEIPDFSPTIKG
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Known secondary structure (DSSP) TTSTTTT
SS

TTSSSTT

TTTT
TT

TT

 .........570.........580.........590.........600.........610.........620.........630
Sequence VLWENWPMDKGVFIAYDDDKVYTYVFHKDTIQGAKVILAGSTKVPFAHKPLLLYNGELTCQTQSGKVNNI
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Known secondary structure (DSSP)

STT
TT
SS
S
TT
S

TT
TT
TTS
 .........640.........650.........660.........670.........680.........690.........700
Sequence YLSTHGFLSNLKDTGPDELRPMLAQNLMLKRFSDAWEMCRILNDEAAWNELARACLHHMEVEFAIRVYRR
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Known secondary structure (DSSP)
GGGTT
S
TTT


TT
 .........710.........720.........730.........740.........750.........760.........770
Sequence IGNVGIVMSLEQIKGIEDYNLLAGHLAMFTNDYNLAQDLYLASSCPIAALEMRRDLQHWDSALQLAKHLA
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Known secondary structure (DSSP) T
TT


TT
SS
TTT

 .........780.........
Sequence PDQIPFISKEYAIQLEFAG
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Known secondary structure (DSSP) GGG


Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


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Accessibility Statement
Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
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