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 Protein Homology/analogY Recognition Engine V 2.0


 

Fold library entry viewer: c8bbeE_

Fold library idPDB HeaderMoleculeTitle
c8bbeE_3.50PDB header: transport proteinChain: E: PDB Molecule: wd repeat-containing protein 35;


Added to library: Sat Dec 24 09:46:03 2022
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence FQGMFFYLSKKISIPNNVKLQCVSWNKEQGFIACGGEDGLLKVLKLETSNLSMNQTLEGHSGSVQVVTWN
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Known secondary structure (DSSP)

S

GGG


SSS

STT






S



S


 .........80.........90.........100.........110.........120.........130.........140
Sequence EQYQKLTTSDENGLIIVWMLYKGSWIEEMINNRNKSVVRSMSWNADGQKICIVYEDGAVIVGSVDGNRIW
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Known secondary structure (DSSP) TTTT
TT
TT
SSS

TTSSSSSBTTS
 .........150.........160.........170.........180.........190.........200.........210
Sequence GKDLKGIQLSHVTWSADSKVLLFGMANGEIHIYDNQGNFMIKMKLSCLVNVTGAISIAGIHWYHGTEGYV
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Known secondary structure (DSSP)

B
TTS




TTSSTTTTT




GGGSS

S





TT

S
 .........220.........230.........240.........250.........260.........270.........280
Sequence EPDCPCLAVCFDNGRCQIMRHENDQNPVLIDTGMYVVGIQWNHMGSVLAVAGFQKAAMQDKDVNIVQFYT
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Known secondary structure (DSSP) STT


TTSSSTT
SS

SS
TTSS

TTSSS
 .........290.........300.........310.........320.........330.........340.........350
Sequence PFGEHLGTLKVPGKEISALSWEGGGLKIALAVDSFIYFANIRPNYKWGYCSNTVVYAYTRPDRPEYCVVF
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Known secondary structure (DSSP) TTS

SS

TTSSTT


STTTT
 .........360.........370.........380.........390.........400.........410.........420
Sequence WDTKNNEKYVKYVKGLISITTCGDFCILATKADATFVLVLCNSIGTPLDPKYIDIVPLFVAMTKTHVIAA
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Known secondary structure (DSSP) TTTTSSTT



TT

SS



SS
 .........430.........440.........450.........460.........470.........480.........490
Sequence SKEAFYTWQYRVARKEGRERIYHVDDTPSGSMDGVLDYSKTIQGTRDPICAITASDKILIVGRESGTIQR
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Known secondary structure (DSSP)
SS





GGGTT


BS






GGGGGS

SS

SSTTS
 .........500.........510.........520.........530.........540.........550.........560
Sequence YSLPNVGLIQKYSLNCRAYQLSLNCNSSRLAIIDISGVLTFFDLDARVTDSTGQQVVGELLKLERRDVWD
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Known secondary structure (DSSP) SSS
B
SS

TTS
TTS
TTS

S

S


 .........570.........580.........590.........600.........610.........620.........630
Sequence MKWAKDNPDLFAMMEKTRMYVFRNLDPEEPIQTSGYICNFEDLEIKSVLLDEILKDPEHPNKDYLINFEI
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Known secondary structure (DSSP)
SS
SSB
SS

TT




STT
TTSTTS

GGG
 .........640.........650.........660.........670.........680.........690.........700
Sequence RSLRDSRALIEKVGIKDASQFIEDNPHPRLWRLLAEAALQKLDLYTAEQAFVRCKDYQGIKFVKRLGKLL
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Known secondary structure (DSSP) T
S

TT
TT
TT
S
 .........710.........720.........730.........740.........750.........760.........770
Sequence SESMKQAEVVGYFGRFEEAERTYLEMDRRDLAIGLRLKLGDWFRVLQLLKTGSGDADDSLLEQANNAIGD
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Known secondary structure (DSSP)
TT
TT
T
SSS


 .........780.........790.........800.........810.........820.........830.........840
Sequence YFADRQKWLNAVQYYVQGRNQERLAECYYMLEDYEGLENLAISLPENHKLLPEIAQMFVRVGMCEQAVTA
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Known secondary structure (DSSP) TT
TTTT
TT
S
TT
TTT
 .........850.........860.........870.........880.........890.........900.........910
Sequence FLKCSQPKAAVDTCVHLNQWNKAVELAKNHSMKEIGSLLARYASHLLEKNKTLDAIELYRKANYFFDAAK
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Known secondary structure (DSSP) TT
TT

TTSTTT
TT
 .........920.........930.........940.........950.........960.........970.........980
Sequence LMFKIADEEAKKGSKPLRVKKLYVLSALLIEQYHEQMKRFTDNAWRGAEAYHFFILAQRQLYEGCVDTAL
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Known secondary structure (DSSP) TT

T

GGG
TTTT
 .........990.........1000.........1010.........1020.........1030.........1040.........1050
Sequence KTALHLKDYEDIIPPVEIYSLLALCACASRAFGTCSKAFIKLKSLETLSSEQKQQYEDLALEIFTKHTSK
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Known secondary structure (DSSP) GGGGTTTS
TBT
TTS
T
SS
 .........1060.........1070.........1080.........1090.........1100.........1110..
Sequence DNRKPELDSLMEGGEGKLPTCVATGSPITEYQFWMCSVCKHGVLAQEISHYSFCPLCHSPVG
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Known secondary structure (DSSP) BSS


TT
TT



B
TTTSSB


SS

TTT


TTGGGG
SB
TTT

B


Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


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Accessibility Statement
Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
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