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 Protein Homology/analogY Recognition Engine V 2.0


 

Fold library entry viewer: c8baoB_

Fold library idPDB HeaderMoleculeTitle
c8baoB_2.06PDB header: dna binding proteinChain: B: PDB Molecule: duf1887 family protein;


Added to library: Sat Dec 3 11:18:11 2022
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence MSHVQITLVGGQAAPVYNGITYYNPDKVILVCSKQTQNEAMRIKAEFPDIAEIKVMDPVNIAEIVSETRA
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Known secondary structure (DSSP)



S


S
SSSSTTT

SS
 .........80.........90.........100.........110.........120.........130.........140
Sequence LADSMPDDEIYVNISGGTKSWAFYFSRIFSERSNTKIFYIDQNNTIWNFTDQTHSQANFDLNLDVQFRLY
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Known secondary structure (DSSP) T
TT

SSS
TTSSS
TT
TTTT
SS


T
 .........150.........160.........170.........180.........190.........200.........210
Sequence GNSLKEYKLVSDFADDDLTIIPKIYKIRSFDKRNFGKLMNLYSENSENVFFDLDNGSYLRWDNEQQLFEI
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Known secondary structure (DSSP) T




GGGS
T
STT
S
TTS
TTTT
 .........220.........230.........240.........250.........260.........270.........280
Sequence NIRNRDGQSKHEILKSTHIRRLLRNYTWLELEIARVLSGWKFAKEVRLNGIFRDKHENAKNEIDCIVNLG
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Known secondary structure (DSSP)
SSS


TTTSTTT
TT
S
TTS

S
 .........290.........300.........310.........320.........330.........340.........350
Sequence NKILFVECKSHITNITDIDKFKNAVKVYGGSGCKALFTTIDPIRNDALEKCRDSNIIPFCIEKNGGINNY
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Known secondary structure (DSSP) SSSS
SSTTT
TT
SS


TT
SGGGT
TTT
 .........360.......
Sequence KSNLFEILEKEILNINP
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Known secondary structure (DSSP) TT




Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


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Accessibility Statement
Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
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Michael Sternberg 
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