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 Protein Homology/analogY Recognition Engine V 2.0


 

Fold library entry viewer: c8b4hC_

Fold library idPDB HeaderMoleculeTitle
c8b4hC_3.35PDB header: dna binding proteinChain: C: PDB Molecule: putative transposase for insertion sequence element is5376;


Added to library: Sat May 6 08:49:56 2023
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence MITRGEFFMIKEMYERGMSISDIARELGIDRKTVRKYIHSPNPPSKSKRKQRKSKLDPFKPYLQKRMLED
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Known secondary structure (DSSP)


T

TS
T
SS


S







SSGGGTT
 .........80.........90.........100.........110.........120.........130.........140
Sequence GVFNSEKLFFEIRQQGYTGGKTILKDYMKPFRETAKKKYTVRYETLPGEQMQVDWKEVGEVVIEGKKVKL
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Known secondary structure (DSSP)



TTT


S
STT






TTS


TT

 .........150.........160.........170.........180.........190.........200.........210
Sequence SLFVATLGYSRMKYAVFTTSQDQEHLMECLIQSFKYFGGVPKKVLFDNMKTVTDGREQGVVKWNQRFSEF
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Known secondary structure (DSSP) TTT

S

STSB
S
S
TTT
SS

 .........220.........230.........240.........250.........260.........270.........280
Sequence ASYYGFIPKVCRRAIQYIMDHFYVGTAFESIEELNFLLHRWLDQVANRKPNATTGISPQERWAEESLKPL
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Known secondary structure (DSSP) TT



TTTT


S
TTT


TTT


T


B

 .........290.........300.........310.........320.........330.........340.........350
Sequence PLKDYDTSYLSYRKVHWDGSFSYKGEQWLLSAEYAGKEILVKERLNGDIRLYFRGEEISHVDQQKKVISF
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Known secondary structure (DSSP)
SS




B



TTSTT

GGGTTS
TTS
TT






SS


 .........360..
Sequence AEKIKKKQTEMA
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Known secondary structure (DSSP)


Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


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Accessibility Statement
Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
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Michael Sternberg 
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