PHYRE Protein Fold Recognition Server

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Protein Homology/analogY Recognition Engine V 2.0

Fold library entry viewer: c8b41E_

Fold library id	PDB Header	Molecule	Title
c8b41E_	3.80	PDB header: membrane protein	Chain: E: PDB Molecule: volume-regulated anion channel subunit lrrc8c;

Links to external resources
Added to library: Sat Dec 17 08:52:00 2022

1 . . . . . . . . 10 . . . . . . . . . 20 . . . . . . . . . 30 . . . . . . . . . 40 . . . . . . . . . 50 . . . . . . . . . 60 . . . . . . . . . 70

Sequence A F R V L K P W W D V F T D Y L S V A M L M I G V F G C T L Q V M Q D K I I C L P K R V E M K G L K T D L D L Q Q Y S F I N Q M C Y E R A L

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)
S T T
S
T S

. . . . . . . . . 80 . . . . . . . . . 90 . . . . . . . . . 100 . . . . . . . . . 110 . . . . . . . . . 120 . . . . . . . . . 130 . . . . . . . . . 140

Sequence H W Y A K Y F P Y L V L I H T L V F M L C S N F W F K F P G S S S K I E H F I S I L G K C F D S K V K K F R L H V E E G D I L Y A M Y V R Q

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)
S
T T T

. . . . . . . . . 150 . . . . . . . . . 160 . . . . . . . . . 170 . . . . . . . . . 180 . . . . . . . . . 190 . . . . . . . . . 200 . . . . . . . . . 210

Sequence T V L K V I K F L I I I A Y N S A L V S K V Q F T V D C N V D I Q D M T G Y K N F S C N H T M A H L F S K L S F C Y L C F V S I Y G L T C L

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) G G G
S
T T T S S
S T T

. . . . . . . . . 220 . . . . . . . . . 230 . . . . . . . . . 240 . . . . . . . . . 250 . . . .

Sequence Y T L Y W L F Y R S L R E Y D V K N D F A F M L H M I D Q Y D P L Y S K R F A V F L S E

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) S S S
T T
T T

Download: PDB structure FASTA sequence
Hidden Markov model

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Please cite: The Phyre2 web portal for protein modeling, prediction and analysis

Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]

© Structural Bioinformatics Group, Imperial College, London

Michael Sternberg

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	1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70
Sequence	A	F	R	V	L	K	P	W	W	D	V	F	T	D	Y	L	S	V	A	M	L	M	I	G	V	F	G	C	T	L	Q	V	M	Q	D	K	I	I	C	L	P	K	R	V	E	M	K	G	L	K	T	D	L	D	L	Q	Q	Y	S	F	I	N	Q	M	C	Y	E	R	A	L
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)			S	T	T																																					S																											T	S
	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140
Sequence	H	W	Y	A	K	Y	F	P	Y	L	V	L	I	H	T	L	V	F	M	L	C	S	N	F	W	F	K	F	P	G	S	S	S	K	I	E	H	F	I	S	I	L	G	K	C	F	D	S	K	V	K	K	F	R	L	H	V	E	E	G	D	I	L	Y	A	M	Y	V	R	Q
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)																												S																													T	T	T
	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210
Sequence	T	V	L	K	V	I	K	F	L	I	I	I	A	Y	N	S	A	L	V	S	K	V	Q	F	T	V	D	C	N	V	D	I	Q	D	M	T	G	Y	K	N	F	S	C	N	H	T	M	A	H	L	F	S	K	L	S	F	C	Y	L	C	F	V	S	I	Y	G	L	T	C	L
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)																			G	G	G			S									T	T	T	S	S		S							T	T
	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.
Sequence	Y	T	L	Y	W	L	F	Y	R	S	L	R	E	Y	D	V	K	N	D	F	A	F	M	L	H	M	I	D	Q	Y	D	P	L	Y	S	K	R	F	A	V	F	L	S	E
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)							S	S	S		T	T																				T	T