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 Protein Homology/analogY Recognition Engine V 2.0


 

Fold library entry viewer: c8b3eA_

Fold library idPDB HeaderMoleculeTitle
c8b3eA_1.26PDB header: membrane proteinChain: A: PDB Molecule: variant surface glycoprotein 397;


Added to library: Sat Jan 28 08:58:17 2023
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence TPANAAADAANDVCKALWFLDTLADKIRSTINSAIANKRFLEQQAQALKLAYLSASGSRRTGYGILTGLA
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Known secondary structure (DSSP)


S

T
 .........80.........90.........100.........110.........120.........130.........140
Sequence IDRMNEQENQIKDAEAVYQAAANKLTNLSSKLRTAAALQSRRPKLTAAPTKANAVAGKTATASDTCKYES
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Known secondary structure (DSSP) T



S

SS
TTTSTT
S

TT
 .........150.........160.........170.........180.........190.........200.........210
Sequence QAEAAEHSPCPDVAASTPALAASKITLSGLTKLPYPGEQFTTTMTADIYAFAKGTLSNANTKSAGAYYCS
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GGG
GGG

STT





S
GGG




TT
SS
 .........220.........230.........240.........250.........260.........270.........280
Sequence DDAATYTSGSIAGTHALGAIVLPKPTGHGITPTDFLNGSCVEETGEANSYAYEKSAVLHAVCQASKATLT
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Known secondary structure (DSSP) SS


TT

SS






B


B



S
TTSS


 .........290.........300.........310.........320.........330.........340.........350
Sequence ITASALDVQLTDFKHGGQHATYTMAALKGQGLMPESAEEIDKTKAEEFLKVVFGTKESAIAEDFIKPLSA
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Known secondary structure (DSSP)



GGG

GGGGSTTSTTTTSS
TT

S

T
SSTTTTT
 .........360.........370.........380.........
Sequence NKLSFAGKGKEQKEEANKIAKSNDAGTAIAFFAAKSAKV
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Known secondary structure (DSSP) S
SSSS
TTSTT


Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


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Accessibility Statement
Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
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Michael Sternberg 
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