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 Protein Homology/analogY Recognition Engine V 2.0


 

Fold library entry viewer: c8asvA_

Fold library idPDB HeaderMoleculeTitle
c8asvA_4.35PDB header: translationChain: A: PDB Molecule: elongator complex protein 1;


Added to library: Sat Dec 10 09:25:15 2022
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence MRNLITLNKGKFKPTASTAEGDEDDLSFTLLDSVFDTLSDSITCVLGSTDIGAIEVQQFMKDGSRNVLAS
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Known secondary structure (DSSP)







SSSS



S



SSSSTTTTSS

 .........80.........90.........100.........110.........120.........130.........140
Sequence FNIQTFDDKLLSFVHFADINQLVFVFEQGDIITATYDPVSLDPAETLIEIMGTIDNGIAAAQWSYDEETL
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Known secondary structure (DSSP)
SS




SSS
SSS


SS

SGGG





TT

S
SSS

 .........150.........160.........170.........180.........190.........200.........210
Sequence AMVTKDRNVVVLSKLFEPISEYHLEVDDLKISKHVTVGWGKKETQFRGKGARAMEREALASLKASGLVGN
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Known secondary structure (DSSP)
TTS
TTS


TT



S

STT




TTS


TTT


S




TTT




S
 .........220.........230.........240.........250.........260.........270.........280
Sequence QLRDPTMPYMVDTGDVTALDSHEITISWRGDCDYFAVSSVEEVPDEDDETKSIKRRAFRVFSREGQLDSA
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Known secondary structure (DSSP)
S


S
SSS



B

TT






SSSS


TTSTT


TTS
 .........290.........300.........310.........320.........330.........340.........350
Sequence SEPVTGMEHQLSWKPQGSLIASIQRKTDLGEEDSVDVIFFERNGLRHGEFDTRLPLDEKVESVCWNSNSE
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Known secondary structure (DSSP)



TTB
S


TTSS


SSS


TTS

S
TT





SSSS
 .........360.........370.........380.........390.........400.........410.........420
Sequence ALAVVLANRIQLWTSKNYHWYLKQELYASDISYVKWHPEKDFTLMFSDAGFINIVDFAYKMAQGPTLEPF
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Known secondary structure (DSSP)

SSSSS

S







SSS
S

SSS






SGGG
 .........430.........440.........450.........460.........470.........480.........490
Sequence DNGTSLVVDGRTVNITPLALANVPPPMYYRDFETPGNVLDVACSFSNEIYAAINKDVLIFAAVPSIEEMK
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Known secondary structure (DSSP)


TTTTT



SSS

SS

S
SSS

SS
S
 .........500.........510.........520.........530.........540.........550.........560
Sequence KGKHPSIVCEFPKSEFTSEVDSLRQVAFINDSIVGVLLDTDNLSRIALLDIQDITQPTLITIVEVYDKIV
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Known secondary structure (DSSP) T


STTTTSS
S



TTT
SS


SSS









SS
 .........570.........580.........590.........600.........610.........620.........630
Sequence LLRSDFDYNHLVYETRDGTVCQLDAEGQLMEITKFPQLVRDFRVKRVHNTSAEDDDNWSAESSELVAFGI
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Known secondary structure (DSSP)
TTSSSTTS
TTS

SS






SS


SS



 .........640.........650.........660.........670.........680.........690.........700
Sequence TNNGKLFANQVLLASAVTSLEITDSFLLFTTAQHNLQFVHLNSTDFKPLPLVEEGVEDERVRAIERGSIL
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Known secondary structure (DSSP) TT


SS
B

SSTTTT



S








S

SSSS

TT
 .........710.........720.........730.........740.........750.........760.........770
Sequence VSVIPSKSSVVLQATRGNLETIYPRIMVLAEVRKNIMAKRYKEAFIVCRTHRINLDILHDYAPELFIENL
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Known secondary structure (DSSP) TTTT
SSS


TT
TTTT

GGGGTTT
 .........780.........790.........800.........810.........820.........830.........840
Sequence EVFINQIGRVDYLNLFISCLSEDDVTKTKYKETLYSGISKSFGMEPAPLTEMQIYMKKKMFDPKTSKVNK
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Known secondary structure (DSSP)


T

SS
TS
GGGSS
SS










GGGS

TTT
 .........850.........860.........870.........880.........890.........900.........910
Sequence ICDAVLNVLLSNPEYKKKYLQTIITAYASQNPQNLSAALKLISELENSEEKDSCVTYLCFLQDVNVVYKS
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Known secondary structure (DSSP) TT
SSSS

T
S
SS
 .........920.........930.........940.........950.........960.........970.........980
Sequence ALSLYDVSLALLVAQKSQMDPREYLPFLQELQDNEPLRRKFLIDDYLGNYEKALEHLSEIDKDGNVSEEV
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Known secondary structure (DSSP) TT
STTS


TTS
T
TTTS


 .........990.........1000.........1010.........1020.........1030.........1040.........1050
Sequence IDYVESHDLYKHGLALYRYDSEKQNVIYNIYAKHLSSNQMYTDAAVAYEMLGKLKEAMGAYQSAKRWREA
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Known secondary structure (DSSP) T
TTTT
TT
T
TT
 .........1060.........1070.........1080.........1090.........1100.........1110.........1120
Sequence MSIAVQKFPEEVESVAEELISSLTFEHRYVDAADIQLEYLDNVKEAVALYCKAYRYDIASLVAIKAKKDE
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Known secondary structure (DSSP) T
GGGTT

TTS

TT
TT
SS
 .........1130.........1140.........1150.........1160.........1170.........1180.........1190
Sequence LLEEVVDPGLGEGFGIIAELLADCKGQINSQLRRLRELRAKKEEARGKKGTIYEEEYLVQSVGRLIERLN
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Known secondary structure (DSSP) T


TTS
SS



SSSS

SS
S
 .........1200.........1210.........1220.........1230.....
Sequence QTKPDAVRVVEGLCRRNMREQAHQIQKNFVEVLDLLKANVKEIYS
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Known secondary structure (DSSP) TSSTT
SS







Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


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Accessibility Statement
Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
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