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  Protein Homology/analogY Recognition Engine V 2.2
 

Fold library entry viewer: c8agdA_

Fold library idPDB HeaderMoleculeTitle
c8agdA_UNKPDB header: Blank PDB headerPDB COMPND:


Added to library: Sat Apr 15 11:03:30 2023
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence VSRGVILGYPDGTFRGTQNLTRYEAAIIIARLLDQMRDGETPAGMTAEDMTALQNAIQELAADLAALGVR
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Known secondary structure (DSSP)





SS






SSS

TTT
S
S
TTTSS
TT
S

 .........80.........90.........100.........110.........120.........130.........140
Sequence VSDLEANAVSKDDFARLEARIEEVAAAGGEQGATEALQGRVDEYDALRADVDDNASSIAALNDLTVLLNQ
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Known secondary structure (DSSP) SSTTTTTS
TTTTTT















TTTT
STTGGGTTSS
S
 .........150.........160.........170.........180.........190.........200.........210
Sequence DILDLQDRVSAVEAAQADFVQRSDFDALGGRVTTVETRVETVNNSLTGRIAALERNAFSVKPSLTIGYSV
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Known secondary structure (DSSP)
SSTTTSS

T

 .........220.........230.........240.........250.........260.........270.........280
Sequence SRTSRNFDVDRLFPLNADGTVANNAFTSGGIDTDTGAQRRDFGDFGNASDPVVAGAAGLYGFADGVSYTV
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Known secondary structure (DSSP) SS



TTSS
B
TTS
B


SS




BTTTTB
GGGB

STT


B


TTTTTSSSS



 .........290.........300.........310.........320.........330.........340.........350
Sequence YFTDGSTATFDGLNPADYKVPTGKVIDTTKGRNGFGFNNLARYKEGSTDIGISLGFDTSGQFSQVTSGTG
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Known secondary structure (DSSP) BTTS

SS
GGG




SS

B
TTSSSSB







S






 .........360.........370.........380.........390.........400.........410.........420
Sequence GSLFSTAGRLQVNQIDLNFGLVTGLPSDAYVDTNGNGKKDDGEATGRGTYLGSGGTAAILRDPAGNVYRP
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Known secondary structure (DSSP)
SSS








S

TT



SSSSSS

TT


STTSSSSS


TTS


 .........430.........440.........450.........460.........470.........480.........490
Sequence VFFRFKNATTQFSVGNNPVIVTLGQQQKFYFSDYVFDNNYDGRGDGFTVTVDGSNVPVIGAWKPQIKGVY
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Known secondary structure (DSSP)




SS
B
S
TTT

BTTT


TT
SSS
TT

 .........500.........510.........520.........530.........540.........550.........560
Sequence GSRSGLDGTAEAGYGVYYRGVRAQITPVGTLTAGIHYAQEGRDMFGAAQNTTSTPSDVTTYGADLHGKAF
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Known secondary structure (DSSP) TSS

TTSTTTT

SSS


SS

S


S


S
 .........570.........580.........590.........600.........610.........620.........630
Sequence GVELHSEYATSRVRPNTANAAVQTSNAFYARVATRKDNLAFDLNTPAAKFGNDTFGVSLYDLNYRKIDAG
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Known secondary structure (DSSP) SS



SSS


B

B


S
TTS
TTS
S


S
SSS


TT
 .........640.........650.........660.........670.........680.........690.........700
Sequence YNNVAGISEYGYGSYSRTSAQNIAYNPDTGVTAPFANLDRQAYTDANNDGTSDRNADGTVVATNTKIGQM
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Known secondary structure (DSSP)
STTTTT
SS

S
S
SSSSTT


BTTTTB

SS




SSSSS

B
TTS
B
 .........710.........720.........730.........740.........750.........760.........770
Sequence GFGVKAAANLGPVAIGGYYDTSTGANGDNANRMTEAGGSAKVAYSIFSLRGTYNTLDSNRPQIYRDAAGT
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Known secondary structure (DSSP)
SS
TT

GGG
TT
S


SSS
 .........780.........790.........800.........810.........820.........830.........840
Sequence QIIGDAKVRRYAVQADVTPGLGLFVGAYYRDVNVNGVRSTTDRGLLGRGYLASSFEPGVGNNAYRTGLRC
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Known secondary structure (DSSP)



SSSTTB

SB

SGGGGSS


B

SSTT



BSS

T
 .........850.........860.........870.........880.........890.........900.........910
Sequence ADNNFGTGTRDIDGVGGVLNPAVNLDQSRTATCFTSYGVEAGHAGDNANALVKDLFFRVGYSRVYVPTTA
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Known secondary structure (DSSP) TTT






BSSSSSSTT
TT

GGG





BS
SSSSS
SSTT

SSS
 .........920.........930.........940.........950.........960.........970.........980
Sequence TATTGDFSGSVTYGDARYDRKVGVANVRLAGSFSTTNTQLDSRPAGTRGAVGLIVRTDPLENVPFRPQFN
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Known secondary structure (DSSP) S
S




SSS



SS

SS

BS



SSSTT
 .........990.........1000.........1010.........1020.........1030.........1040.........1050
Sequence GQVGYYTADNRVAAGNYNANATKYGAGVVLNDFLLPQTKIGVRYDGYMAQNRQYTPFDGDGTQGYFSDAN
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Known secondary structure (DSSP) TT

S

SSTT
BSS


SSS




 .........1060.........1070.........1080.........1090.........1100.........1110.
Sequence NNRRTNLNGVYVEGAYQDLIFSYGTYTLSQKDLNGVEYGSGINNGQPARGQTFKISYKVNF
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Known secondary structure (DSSP)

SSS
SS



SSTTTSS





Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


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Accessibility Statement
Please cite: Phyre2.2: A Community Resource for Template-based Protein Structure Prediction
Powell HR et al. Journal of Molecular Biology (2025) in press DOI: https://doi.org/10.1016/j.jmb.2025.168960
 
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Michael Sternberg  
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