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 Protein Homology/analogY Recognition Engine V 2.0


 

Fold library entry viewer: c8ae1C_

Fold library idPDB HeaderMoleculeTitle
c8ae1C_3.25PDB header: structural proteinChain: C: PDB Molecule: s-layer protein slpa;


Added to library: Sat Dec 3 11:15:54 2022
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence FVQRSDFDALGGRVTTVETRVETVNNSLTGRIAALERNAFSVKPSLTIGYSVSRTSRNFDVDRLFPLNAD
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Known secondary structure (DSSP)


T


SS
B

TTSS
B
TT
 .........80.........90.........100.........110.........120.........130.........140
Sequence GTVANNAFTSGGIDTDTGAQRRDFGDFGNASDPVVAGAAGLYGFADGVSYTVYFTDGSTATFDGLNPADY
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Known secondary structure (DSSP) S
B


TT




BTTTTB
GGGB

SSSS

B


SGGGTTTTB



TTT
SS
GGG
 .........150.........160.........170.........180.........190.........200.........210
Sequence KVPTGKVIDTTKGRNGFGFNNLARYKEGSTDIGISLGFDTSGQFSQVTSGTGGSLFSTAGRLQVNQIDLN
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Known secondary structure (DSSP)


TT

B
STTTBTT







S







SSS


S




 .........220.........230.........240.........250.........260.........270.........280
Sequence FGLVTGLPSDAYVDTNGNGKKDDGEATGRGTYLGSGGTAAILRDPAGNVYRPVFFRFKNATTQFSVGNNP
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Known secondary structure (DSSP) SS

TT
B

SSSSSS

TT

BSTTSSSSSS

B
TTS
B









SS
 .........290.........300.........310.........320.........330.........340.........350
Sequence VIVTLGQQQKFYFSDYVFDNNYDGRGDGFTVTVDGSNVPVIGAWKPQIKGVYGSRSGLDGTAEAGYGVYY
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Known secondary structure (DSSP) SS



SSSS
SS


SS
TTTTTS

TSS

TTSTTSS
 .........360.........370.........380.........390.........400.........410.........420
Sequence RGVRAQITPVGTLTAGIHYAQEGRDMFGAAQNTTSTPSDVTTYGADLHGKAFGVELHSEYATSRVRPNTA
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Known secondary structure (DSSP)

STT

TT

S


STT
SST
 .........430.........440.........450.........460.........470.........480.........490
Sequence NAAVQTSNAFYARVATRKDNLAFDLNTPAAKFGNDTFGVSLYDLNYRKIDAGYNNVAGISEYGYGSYSRT
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Known secondary structure (DSSP) T



S
B
TTS
B
SSS
SB

B
SS
TT
ST
SS

B
S
SS
 .........500.........510.........520.........530.........540.........550.........560
Sequence SAQNIAYNPDTGVTAPFANLDRQAYTDANNDGTSDRNADGTVVATNTKIGQMGFGVKAAANLGPVAIGGY
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Known secondary structure (DSSP) SSTT


BTTTTB

SS
B


SS
SSS

B
TTS
B


TT
 .........570.........580.........590.........600.........610.........620.........630
Sequence YDTSTGANGDNANRMTEAGGSAKVAYSIFSLRGTYNTLDSNRPQIYRDAAGTQIIGDAKVRRYAVQADVT
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Known secondary structure (DSSP)

TT

GGG


TT

SSS

 .........640.........650.........660.........670.........680.........690.........700
Sequence PGLGLFVGAYYRDVNVNGVRSTTDRGLLGRGYLASSFEPGVGNNAYRTGLRCADNNFGTGTRDIDGVGGV
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Known secondary structure (DSSP)
STTTT
SB
TTGGGG
S



SSSS



S

TTSS






BSSSSSST
 .........710.........720.........730.........740.........750.........760.........770
Sequence LNPAVNLDQSRTATCFTSYGVEAGHAGDNANALVKDLFFRVGYSRVYVPTTATATTGDFSGSVTYGDARY
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Known secondary structure (DSSP) T
TT

GGG



S
B
TTSSS
SSTT
SSTT
S




 .........780.........790.........800.........810.........820.........830.........840
Sequence DRKVGVANVRLAGSFSTTNTQLDSRPAGTRGAVGLIVRTDPLENVPFRPQFNGQVGYYTADNRVAAGNYN
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Known secondary structure (DSSP) TTSS
BTTB
SS



TTSSS


TT

 .........850.........860.........870.........880.........890.........900.........910
Sequence ANATKYGAGVVLNDFLLPQTKIGVRYDGYMAQNRQYTPFDGDGTQGYFSDANNNRRTNLNGVYVEGAYQD
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Known secondary structure (DSSP) SS
SSTTS


TTS






TT
 .........920.........930.........940.........950...
Sequence LIFSYGTYTLSQKDLNGVEYGSGINNGQPARGQTFKISYKVNF
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Known secondary structure (DSSP) TT

B
SSSSSSS






Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


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Accessibility Statement
Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
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