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 Protein Homology/analogY Recognition Engine V 2.0


 

Fold library entry viewer: c8adlX_

Fold library idPDB HeaderMoleculeTitle
c8adlX_2.95PDB header: signaling proteinChain: X: PDB Molecule: vacuolar membrane-associated protein iml1;


Added to library: Sat Nov 5 10:54:48 2022
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence IKAYQAELGYHESRFSENLVMLNLVEFPDIKPGDLVELKTYHKNPSASNGDKKIYFIAKDFDGETKRRAK
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Known secondary structure (DSSP)





TTT
S
S

TTT
TTS
TT


SSS

TTTT







S
 .........80.........90.........100.........110.........120.........130.........140
Sequence TSNVSILSGQLQTLLDLPSRSRIWIKLKPNKFDLQADVVEFNIKDCLLNRGDMWVLSSKLVDTCVFMDQR
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Known secondary structure (DSSP) S
S
SST

TT





GGGB
S
SS


TTTTT
 .........150.........160.........170.........180.........190.........200.........210
Sequence LAFLDSIRGTIKGIYRNGKKIVSGYIGEQTRIIFRSESARLIFLIQITDEMWNFEETGEQLFQKMVNSFF
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Known secondary structure (DSSP)
STTT




TTS
SS
SS

GGGS
B
SSS
BTT
 .........220.........230.........240.........250.........260.........270.........280
Sequence PKIFKKWKDVDTHHTITIAFAISMDLSDTSFKDLTPGESLKNSQDYFRIVVDQVSIIHWVDIMETLREEF
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Known secondary structure (DSSP) T



S


GGG

TT


SSGGG
 .........290.........300.........310.........320.........330.........340.........350
Sequence MEIRKDLLNKQTDKGYSVANGRFSPVIKSNFLELVNFATTILTDPFKQLDLRHTTTHVMIISPGSGLFDV
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Known secondary structure (DSSP) S
TTSS



STTS
GGGS
TTS


TT


SS
S
 .........360.........370.........380.........390.........400.........410.........420
Sequence DYSLLRLTGKKLLSLEMTMDLICLSKAPLHIVPLFRYRDFENKLHHCVPLWLSVFFWNEWTPRCKIYDLQ
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Known secondary structure (DSSP)
TTS


SS


SS
SS
TT

SS






S

 .........430.........440.........450.........460.........470.........480.........490
Sequence MMGITENELIREVDVEYLQLNKKVKSLSEFMNDYDKNAFEVETWVDIKSPSIPVSSEFANELLPIRWKDV
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Known secondary structure (DSSP) TT
S
TTTS




S





SS

STTT



S
TTS



S
STTTT
 .........500.........510.........520.........530.........540.........550.........560
Sequence WRSFTTPAELPITISDFPSKDDFDRNFIFRNHSVTLNTDQEQYNQTYKDLLRDMIYMRLLTGFQICVGRQ
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Known secondary structure (DSSP)
S
B


S




TTS



TTTSSSS

T

SS
 .........570.........580.........590.........600.........610.........620.........630
Sequence VEKIELSRVVNKYLNDAFKLYLMIDSEIHRITCSSSGIIDVERYLRLFDQVPSYIPLVKTRYESSFRDAM
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Known secondary structure (DSSP) TT



S







SS

SS




SSS





SS
SS

S
 .........640.........650.........660.........670.........680.........690.........700
Sequence IDPLHVKRESLNWNQIDQVLAGDRKWHGFRAKYVVLPTDIPPNTYSMNPEEIRVEGLRRLIGSITRSRLR
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Known secondary structure (DSSP) S
TTT








TT






TTGGG

TTB

 .........710.........720.........730.........740.........750.........760.........770
Sequence TEKEKKMFYTGPLYNFINEQQPILMLSNSLVIDVDPAGKSSKQESCTVHYDRVHNPDHCFHIRLEWLTTT
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Known secondary structure (DSSP)
TTTT

B

S




S
SS

SSS

SSB
TTB
SS

 .........780.........790.........800.........810.........820.........830.........840
Sequence PKLIDDLVGNWSRLCERYGLKMIEIPWEELCTIPSVNPFHSFVEIKLAINPWEDPEFKDRELFAKSKFYY
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Known secondary structure (DSSP) TT
SS
GGGSTTT
TTS



SS
TTT
TTS


TT
 .........850.........860.........870.........880.........890.........900.........910
Sequence HVYLLKASGFLLDNRASKFLQNQDIEFDIMYSWGKPQFKYVQYIHHTGAYVAELRENGCLFLAPNNIYIK
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Known secondary structure (DSSP) TT

TT
SSS
S


SSBTTB



SSSSSS
SSS

TTT

 .........920.........930........
Sequence VILNFKSTCLDYQKLRSIFLDAKEMWIT
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Known secondary structure (DSSP) T


Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


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Accessibility Statement
Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
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