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 Protein Homology/analogY Recognition Engine V 2.0


 

Fold library entry viewer: c8a7eC_

Fold library idPDB HeaderMoleculeTitle
c8a7eC_5.02PDB header: hydrolaseChain: C: PDB Molecule: pappalysin-1;


Added to library: Sat Nov 5 11:38:38 2022
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence SRALYFSGRGEQLRLRADLELPRDAFTLQVWLRAEGGQRSPAVITGLYDKCSYISRDRGWVVGIHTISDQ
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Known secondary structure (DSSP)

SSS


TTS


SS

SS

SSTT
SS
TT
S
T
 .........80.........90.........100.........110.........120.........130.........140
Sequence DNKDPRYFFSLKTDRARQVTTINAHRSYLPGQWVYLAATYDGQFMKLYVNGAQVATSGEQVGGIFSPLTQ
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Known secondary structure (DSSP) T


SSSSS

SS


TT


SS
TT

S
S
SS
GGGG
 .........150.........160.........170.........180.........190.........200.........210
Sequence KCKVLMLGGSALNHNYRGYIEHFSLWKVARTQREILSDMETHGAHTALPQLLLQENWDNVKHAWSPMKDG
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Known secondary structure (DSSP) TTSB
TTS
B
SS


SS




SS

SSS
GGG
 .........220.........230.........240.........250.........260.........270.........280
Sequence SSPKVEFSNAHGFLLDTSLEPPLCGQTLCDNTEVIASYNQLSSFRQPKVVRYRVVNLYEDDHKNPTVTRE
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Known secondary structure (DSSP)




S
S

SS






SS

SGGG

SSTTS

TTS
S
SS
 .........290.........300.........310.........320.........330.........340.........350
Sequence QVDFQHHQLAEAFKQYNISWELDVLEVSNSSLRRRLILANCDISKIGDENCDPECNHTLTGHDGGDCRHL
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Known secondary structure (DSSP) TTTT
SSSS

TT
SSSSS

TTT

GGGTTT


 .........360.........370.........380.........390.........400.........410.........420
Sequence RHPAFVKKQHNGVCDMDCNYERFNFDGGECCDPEITNVTQTCFDPDSPHRAYLDVNELKNILKLDGSTHL
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Known secondary structure (DSSP)
GGGGSTTTTSSS

TTTSSTTTTTTT
TTTS
STTT


TT
TT
S


TTTS
 .........430.........440.........450.........460.........470.........480.........490
Sequence NIFFAKSSEEELAGVATWPWDKEALMHLGGIVLNPSFYGMPGHTHTMIHQIGHSLGLYHVFRGISEIQSC
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Known secondary structure (DSSP)
B


SS
S

B

TTSGGGSSTT


TTTTTBTTB
TT


TTTTTTSSSST
 .........500.........510.........520.........530.........540.........550.........560
Sequence SDPCMETEPSFETGDLCNDTNPAPKHKSCGDPGPGNDTCGFHSFFNTPYNNFMSYADDDCTDSFTPNQVA
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Known secondary structure (DSSP) T
TT

SS
BSSSTT
BTTS



S

SSS


TT

SS
S



S

SSBTTSSS
TTT

B

 .........570.........580.........590.........600.........610.........620.........630
Sequence RMHCYLDLVYQGWQPSRKPAPVALAPQVLGHTTDSVTLEWFPPIDGHFFERELGSACHLCLEGRILVQYA
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Known secondary structure (DSSP) TTTTTSSS




BSS


SS



BTT


B


SSSGGGGTTTB
 .........640.........650.........660.........670.........680.........690.........700
Sequence SNASSPMPCSPSGHWSPREAEGHPDVEQPCKSSVRTWSPNSAVNPHTVPPACPEPQGCYLELEFLYPLVP
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Known secondary structure (DSSP)



TTSSS




STTSBS


SSSSS

TTSB
SGGGS
TTS





STT

 .........710.........720.........730.........740.........750.........760.........770
Sequence ESLTIWVTFVSTDWDSSGAVNDIKLLAVSGKNISLGPQNVFCDVPLTIRLWDVGEEVYGIQIYTLDEHLE
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Known secondary structure (DSSP)

SSS
SSTTTT








SSS

TT

S


SS
 .........780.........790.........800.........810.........820.........830.........840
Sequence IDAAMLTSTADTPLCLQCKPLKYKVVRDPPLQMDVASILHLNRKFVDMDLNLGSVYQYWVITISGTEESE
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Known secondary structure (DSSP)
TT
SS
B
S

SS


TT

SSS



TT
TT

 .........850.........860.........870.........880.........890.........900.........910
Sequence PSPAVTYIHGSGYCGDGIIQKDQGEQCDDMNKINGDGCSLFCRQEVSFNCIDEPSRCYFHDGDGVCEEFE
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Known secondary structure (DSSP)



TTS

TTSSS

GGGT
S


S


TTSSB
TTS
B
TT

TTTTB

TTSS


TTT
 .........920.........930.........940.........950.........960.........970.........980
Sequence QKTSIKDCGVYTPQGFLDQWASNASVSHQDQQCPGWVIIGQPAASQVCRTKVIDLSEGISQHAWYPCTIS
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Known secondary structure (DSSP) TTT



STT



SS

SSS
SGGGSS


TT


BSSBS


TTSB


SS
 .........990.........1000.........1010.........1020.........1030.........1040.........1050
Sequence YPYSQLAQTTFWLRAYFSQPMVAAAVIVHLVTDGTYYGDQKQETISVQLLDTKDQSHDLGLHVLSCRNNP
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Known secondary structure (DSSP)

TTTTTTS
SS




BTT




TT



TTT
S
 .........1060.........1070.........1080.........1090.........1100.........1110.........1120
Sequence LIIPVVHDLSQPFYHSQAVRVSFSSPLVAISGVALRSFDNFDPVTLSSCQRGETYSPAEQSCVHFACEKT
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Known secondary structure (DSSP)



TTS



S
TT
SS

TS

TTTTTT
SS


 .........1130.........1140.........1150.........1160.........1170.........1180.........1190
Sequence DCPELAVENASLNCSSSDRYHGAQCTVSCRTGYVLQIRRDDELIKSQTGPSVTVTCTEGKWNKQVACEPV
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Known secondary structure (DSSP) B





TTS
SS

TT

TT

SSS




SSSBTTSBBSS

 .........1200.........1210.........1220.........1230.........1240.........1250.........1260
Sequence DCSIPDHHQVYAASFSCPEGTTFGSQCSFQCRHPAQLKGNNSLLTCMEDGLWSFPEALCELMCLAPPPVP
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Known secondary structure (DSSP) B




TTTSTT
TT
SBTT


TT


S


-
TTSS



S








T
 .........1270.........1280.........1290.........1300.........1310.........1320.........1330
Sequence NADLQTARCRENKHKVGSFCKYKCKPGYHVPGSSRKSKKRAFKTQCTQDGSWQEGACVPVTCDPPPPKFH
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Known secondary structure (DSSP) T

SGGGSS
TT

TT
B
TT

STT


B
TTS
B




B

B




GGGT
 .........1340.........1350.........1360.........1370.........1380.........1390.........1400
Sequence GLYQCTNGFQFNSECRIKCEDSDASQGLGSNVIHCRKDGTWNGSFHVCQEMQGQCSVPNELNSNLKLQCP
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Known secondary structure (DSSP) TTSSTTBTT


SS

TTS

SBSB
SSS
BSS
B


SS


B




S

SS
T
 .........1410.........1420.........1430.........1440.........1450.........1460.........1470
Sequence DGYAIGSECATSCLDHNSESIILPMNVTVRDIPHWLNPTRVERVVCTAGLKWYPHPALIHCVKGCEPFMG
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Known secondary structure (DSSP) TTTBTT
SSTT

TT

STT

TT





TTS
S
TTT


TTTT
 .........1480.........1490.........1500.........1510.........1520....
Sequence DNYCDAINNRAFCNYDGGDCCTSTVKTKKVTPFPMSCDLQGDCACRDPQAQEHS
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Known secondary structure (DSSP) SS
TTT
SGGGTTTSTTTSTTSS
SSTTS
TTTTTS


TTSTTT


Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


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Accessibility Statement
Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
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Michael Sternberg 
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