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 Protein Homology/analogY Recognition Engine V 2.0


 

Fold library entry viewer: c8a5pW_

Fold library idPDB HeaderMoleculeTitle
c8a5pW_3.40PDB header: dna binding proteinChain: W: PDB Molecule: actin related protein 4 (arp4);


Added to library: Sat Dec 17 09:24:35 2022
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence ADIYGGDEVSALVLDPGYCNTRAGFAGEEMPKQVIPSFYGHVDGRDLFGDEVIVPRAGFEVRNYMNRDSM
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Known secondary structure (DSSP)




S





SSSSSSS
SSSSS

SGGG



TT
SB
TTSS
 .........80.........90.........100.........110.........120.........130.........140
Sequence VEDWDAATRVWEYLLVQRLQPPRPTPASKNGLNVKPLTENPLLMTEAPWNTPKAREKAIEVVMENWGTPA
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Known secondary structure (DSSP) BS
TTTTS





GGGGSS


TTTTS

TT

S

S
 .........150.........160.........170.........180.........190.........200.........210
Sequence FWLSRTPVLAAFAAGKATALVIDVGGANTSVTAIHDGMVLKRSIQRSPAAGVWLSGQIRSMWKSQDPPVN
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Known secondary structure (DSSP) TT
SS
SS
TT
GGG
STTTTSSS


 .........220.........230.........240.........250.........260.........270.........280
Sequence VVPTFMVENKKPVEAGAPPDCRLRNFGFPIHDSFRAFEEERVLTEFKESVVEVWRGPGKYLNPGNEDFAK
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Known secondary structure (DSSP)


GGG



TT






SS


T
B


SSS
TTST
 .........290.........300.........310.........320.........330.........340.........350
Sequence TQPGRVFEFPDGSNQMWREQRYRVAEGMWDETAAYPSLNPDEAAITKAQTIPALIKAALDGVDVDLRPNL
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Known secondary structure (DSSP) TS


TTS

STTT
GGG



SSTTS



GGGSTS
GGG
 .........360.........370.........380.........390.........400.........410.........420
Sequence LGNVVVTGSTSLLNGFNDRLNHELTNMYPGLKIKLHAAGLTSERRFGAWIGGSILASLGTFHQMWISRKE
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Known secondary structure (DSSP) TTSGGGGSBTSTTS


SSSSS
GGGTT
GGGGGSS
 .........430..
Sequence YEENGAGIVEKR
Predicted secondary structure



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Known secondary structure (DSSP) S



Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


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Accessibility Statement
Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
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Michael Sternberg 
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