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 Protein Homology/analogY Recognition Engine V 2.0


 

Fold library entry viewer: c8a5aU_

Fold library idPDB HeaderMoleculeTitle
c8a5aU_3.30PDB header: dna binding proteinChain: U: PDB Molecule: actin-like protein arp8;


Added to library: Sat Dec 17 08:55:40 2022
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence KAAEEFAKTLKKIGIEKVETTTLPATGLFQPLMLINQKNYSSDYLKKDDQIFALRDRKFLRNNNLNDEID
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Known secondary structure (DSSP)
TTT





SS
TTTT








TT



TT
STTT



SS

 .........80.........90.........100.........110.........120.........130.........140
Sequence LNDPTATIVIHPGSNSIKIGFPKDDHPVVVPNCVAVPKKWLDLENSEHVENVCLQREQSEEFNNIKSEME
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Known secondary structure (DSSP) TT
SSS

SS
TTSSS


GGGS
SSSSS

TT



TT

 .........150.........160.........170.........180.........190.........200.........210
Sequence KNFRERMRYYKRKVPGNAHEQVVSFNENSKPEIISEKNDPSPIEWIFDDSKLYYGSDALRCVDEKFVIRK
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Known secondary structure (DSSP) TT



TT



GGG
SS



B


SS
GGGGGGB
TTT
 .........220.........230.........240.........250.........260.........270.........280
Sequence PFRGGSFNVKSPYYKSLAELISDVTKLLEHALNSETLNVKPTKFNQYKVVLVIPDIFKKSHVETFIRVLL
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Known secondary structure (DSSP) STT

S
TT
SSTSTTT


TTSGGG

TT

 .........290.........300.........310.........320.........330.........340.........350
Sequence TELQFQAVAIIQESLATCYGAGISTSTCVVNIGAAETRIACVDEGTVLEHSAITLDYGGDDITRLFALFL
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Known secondary structure (DSSP) TTS

ST

S

SS
TT
GGG
S

 .........360.........370.........380.........390.........400.........410.........420
Sequence LQSDFPLQDWKIDSKHGWLLAERLKKNFTTFQDADVAVQLYNFMNRSPNQPTEKYEFKLFDEVMLAPLAL
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Known secondary structure (DSSP) TT
S
SS


SS



GGG
S



SSS
STGG
 .........430.........440.........450.........460.........470.........480.........490
Sequence FFPQIFKLIRTSSHKNSSLEFQLPESRDLFTNELNDWNSLSQFESKEGNLYCDLNDDLKILNRILDAHNI
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Known secondary structure (DSSP) GSTS





TTGGGTS


B
SSS
SB
S


TT

GGG


TT
 .........500.........510.........520.........530.........540.........550.........560
Sequence IDQLQDKPENYGNTLKENFAPLEKAIVQSIANASITADVTRMNSFYSNILIVGGSSKIPALDFILTDRIN
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Known secondary structure (DSSP)
S
SS





TTS
GGGT

SGGGGSTT
 .........570.........580.........590.........600.........610.........620.........630
Sequence IWRPSLLSSASFPQFYKKLTKEIKDLEGHYVNAPDKTEDENKQILQAQIKEKIVEELEEQHQNIEHQNGN
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Known secondary structure (DSSP) S
BTTT
S

SS
TTSGGG
 .........640.........650.........660.........670.........680.........690
Sequence EHIFPVSIIPPPRDMNPALIIWKGASVLAQIKLVEELFITNSDWDVHGSRILQYKCIFTY
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Known secondary structure (DSSP) G
B





SS


TTTTSGGGGGT
GGGGGGTS
SS


Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


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Accessibility Statement
Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
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