PHYRE Protein Fold Recognition Server

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Protein Homology/analogY Recognition Engine V 2.0

Fold library entry viewer: c8a4bC_

Fold library id	PDB Header	Molecule	Title
c8a4bC_	2.80	PDB header: endocytosis	Chain: C: PDB Molecule: rab15 effector protein;

Links to external resources
Added to library: Sat Aug 13 08:27:01 2022

1 . . . . . . . . 10 . . . . . . . . . 20 . . . . . . . . . 30 . . . . . . . . . 40 . . . . . . . . . 50 . . . . . . . . . 60 . . . . . . . . . 70

Sequence P V V C E V V S E A I V H A A Q K L K E Y L G F E Y P P S K L C P A A N T L N E I F L I H F I T F C Q E K G V D E W L T T T K M T K H Q A F

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)
T T T S S
T T
T G G G G

. . . . . . . . . 80 . . . . . . . . . 90 . . . . . . . . . 100 . . . . . . . . . 110 . . . . . . . . . 120 . . . . . . . . . 130 . . . . . . . . . 140

Sequence L F G A D W I W T F W G S D K Q I K L Q L A V Q T L Q M S S L S N P E S R V E W K K S R F D K L E E F C N L I G E D C L G L F I I F G M P G

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) S
S
S S S S
T T
S
T T T T

. . . . . . . . . 150 . . . . . . . . . 160 . . . . . . . . . 170 . . . . . . . . . 180 . . . . . . . . . 190 . . . . . . . . . 200 . . . . .

Sequence K P K D I R G V V L D S V K S Q M V R S H L P G G K A V A Q F V L E T E D C V F I K E L L R N C L S K K D G L R E V G K V Y I S I

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)
T T T T S T T T T S S S
T T

Download: PDB structure FASTA sequence
Hidden Markov model

Image coloured by rainbow N → C terminus

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Please cite: The Phyre2 web portal for protein modeling, prediction and analysis

Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]

© Structural Bioinformatics Group, Imperial College, London

Michael Sternberg

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	1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70
Sequence	P	V	V	C	E	V	V	S	E	A	I	V	H	A	A	Q	K	L	K	E	Y	L	G	F	E	Y	P	P	S	K	L	C	P	A	A	N	T	L	N	E	I	F	L	I	H	F	I	T	F	C	Q	E	K	G	V	D	E	W	L	T	T	T	K	M	T	K	H	Q	A	F
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)																			T	T	T	S	S				T	T																										T	G	G	G	G
	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140
Sequence	L	F	G	A	D	W	I	W	T	F	W	G	S	D	K	Q	I	K	L	Q	L	A	V	Q	T	L	Q	M	S	S	L	S	N	P	E	S	R	V	E	W	K	K	S	R	F	D	K	L	E	E	F	C	N	L	I	G	E	D	C	L	G	L	F	I	I	F	G	M	P	G
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)			S		S								S	S	S	S												T	T								S																				T	T											T	T
	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.
Sequence	K	P	K	D	I	R	G	V	V	L	D	S	V	K	S	Q	M	V	R	S	H	L	P	G	G	K	A	V	A	Q	F	V	L	E	T	E	D	C	V	F	I	K	E	L	L	R	N	C	L	S	K	K	D	G	L	R	E	V	G	K	V	Y	I	S	I
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)																																														T	T	T	T	S	T	T	T	T	S	S	S		T	T