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 Protein Homology/analogY Recognition Engine V 2.0


 

Fold library entry viewer: c8a1fA_

Fold library idPDB HeaderMoleculeTitle
c8a1fA_3.00PDB header: cell adhesionChain: A: PDB Molecule: receptor-type tyrosine-protein phosphatase kappa;


Added to library: Sat Mar 18 11:42:55 2023
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence FSAGGCTFDDGPGACDYHQDLYDDFEWVHVSAQEPHYLPPEMPQGSYMIVDSSDHDPGEKARLQLPTMKE
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Known secondary structure (DSSP)

S

B

SS
SGGGT
B

TTSSS


SSS


S
TTS

SSGGGS
TT



B

 .........80.........90.........100.........110.........120.........130.........140
Sequence NDTHCIDFSYLLYSQKGLNPGTLNILVRVNKGPLANPIWNVTGFTGRDWLRAELAVSTFWPNEYQVIFEA
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Known secondary structure (DSSP) SS


TT



TT



S
SS


SS



TT

 .........150.........160.........170.........180.........190.........200.........210
Sequence EVSGGRSGYIAIDDIQVLSYPCDKSPHFLRLGDVEVNAGQNATFQCIATGNKLWLQRRNGEDIPVAQTKN
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Known secondary structure (DSSP)

SS

SS


SS





TTS


TTS

B



 .........220.........230.........240.........250.........260.........270.........280
Sequence INHRRFAASFRLQEVTKTDQDLYRCVTQSERGSGVSNFAQLIVREPPRPIAPPQLLGVGPTYLLIQLNAN
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Known secondary structure (DSSP)
SSS
S

GGG
STT





SS


SS

TT
 .........290.........300.........310.........320.........330.........340.........350
Sequence SIIGDGPIILKEVEYRMTSGSWTETHAVNAPTYKLWHLDPDTEYEIRVLLTRPGEGGTGLPGPPLITRTK
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Known secondary structure (DSSP) SS




TT
S


SSS

TT

SSTT
B







 ...
Sequence GTK
Predicted secondary structure


SS confidence


Known secondary structure (DSSP)



Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


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Accessibility Statement
Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
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Michael Sternberg 
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