Standard Mode | Switch to Expert Mode | Login to view past jobsRetrieve Phyre Job Id
 
Subscribe to Phyre at Google Groups
Email:
Visit Phyre at Google Groups
 Protein Homology/analogY Recognition Engine V 2.0


 

Fold library entry viewer: c7zskD_

Fold library idPDB HeaderMoleculeTitle
c7zskD_6.80PDB header: biosynthetic proteinChain: D: PDB Molecule: putative polyketide synthase;


Added to library: Sat Oct 1 17:22:05 2022
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence SVVRDVAIIGLSGRYPQAKNVDEFWNRLKEGKNCISEIPKDRWDWQSFFDEEKGKKESMYTKWGGFIDDM
Predicted secondary structure






































SS confidence





































































Known secondary structure (DSSP)




BTTBSSTT





TTT

GGGTB
SSTT
TT
BS

B

S
T
 .........80.........90.........100.........110.........120.........130.........140
Sequence DKFDPLFFQISPKEAEEMDPQERLFLQEAYASIEDAGYTPTTLCESRKVGVFVGVMNGNYPTGATYWSIA
Predicted secondary structure


























SS confidence





































































Known secondary structure (DSSP) T
GGGGT

S
T

TTTT
TT






STT


 .........150.........160.........170.........180.........190.........200.........210
Sequence NRLSYLLNFQGPSVAVDTACSASLTAIHFALESLYSGTSECAIAGGVNLIVDPVHYMKLSALTMLSPSNQ
Predicted secondary structure


















SS confidence





































































Known secondary structure (DSSP) TT

S


GGGTS
S


STTT
B
SSS
 .........220.........230.........240.........250.........260.........270.........280
Sequence CKSFGDQADGFVDGEGVGAIVLKPLDKAIADGDHIYGVIKGSMMNAGGKTNGYTVPNPQAQAQLVADALQ
Predicted secondary structure



























SS confidence





































































Known secondary structure (DSSP)

TTBTT


B
BB
T


S

S
SSTT


 .........290.........300.........310.........320.........330.........340.........350
Sequence RANVHARTVSYLEAHGTGTELGDPIEVAGLTRAFEKDTQDKQFCALGSAKSNIGHCESAAGIAGVTKILL
Predicted secondary structure


































SS confidence





































































Known secondary structure (DSSP) T

GGG







TTTT



S

T
B
GGG
 .........360.........370.........380.........390.........400.........410.........420
Sequence QLKHAQLVPSLHSRTLNPNIDFTKTPFVVQQELAEWRRPIVEINGTTNEYPRIAGISSFGAGGSNAHVII
Predicted secondary structure

























































SS confidence





































































Known secondary structure (DSSP) T



S
SSB
TT

GGGSS

S




TT



TTS
 .........430.........440.........450.........460.........470.........480.........490
Sequence EEYIPEEQKQSSLKITPQNPAIFVLSAKNAERLYEIVQQLLAFIQEHSLSDEHLADMAYTLQVGRVAMEE
Predicted secondary structure








































SS confidence





































































Known secondary structure (DSSP)









TT


SSS
SST

GGGSS


S
 .........500.........510.........520.........530.........540.........550.........560
Sequence RIAVIAGTMKELQQKLTAYVKGQEHIADLYRGQVNRNQEMLDILTSDDELEETIARWMERGKYSKLLDLW
Predicted secondary structure




































SS confidence





































































Known secondary structure (DSSP) SSTT
S

TTTTTSSSST
 .........570.........580.........590.........600.........610.........620.........630
Sequence VKGLSIDWNKLYQEEQPGRISLPTYPFAKESYWTHAGVIHPFLHQNTSDFMEQRFSSMFTGQEFFLSDHV
Predicted secondary structure

























SS confidence





































































Known secondary structure (DSSP) TTT



GGGG
SSS




















SBTTB



SS

S
ST
 .........640.........650.........660.........670.........680.........690.........700
Sequence IKGQRVLPSAAYLEMARAAIQQATGGLRFKNVVWTQPLAVGPEPVQAHIELYPEANGEIVFEIYSDSKQT
Predicted secondary structure
































SS confidence





































































Known secondary structure (DSSP) TT

T


S


SS

TTS


 .........710.........720.........730.........740.........750.........760.........770
Sequence TEIVHSQGSAVLCSIPDIPSFDLSVLQEQCSLRTLSAEQCYDAFKKMGVDYGPAHRGIEQILIGQEQVLA
Predicted secondary structure





























SS confidence





































































Known secondary structure (DSSP)









T
STT
GGG


SS
 .........780.........790.........800.........810.........820.........830.........840
Sequence KLSLPSSVVKTQGQFGLHPSLLDAALQSSLGLMMATSDFSLILPFALEEMVIVGDCSSSMWALIRYREGS
Predicted secondary structure

























SS confidence





































































Known secondary structure (DSSP)

GGGGGGGGG
SS
TT
S

S


S
TT
 .........850.........860.........870.........880.........890.........900.........910
Sequence KAGDRVEKFDIDLCDENGNVQVRMKGFSTRKIANVDIAIIGISGRYPQARNIHDFWKNLRDGKDCITEIP
Predicted secondary structure















































SS confidence





































































Known secondary structure (DSSP)
TT
SS
TTS





BTTBSST



B


 .........920.........930.........940.........950.........960.........970.........980
Sequence KDRWDHSLYFDEAKDKLGKSYSKWGGFIDGVDQFDPLFFHISPREAELMDPQERLFLQCVYETIEDAGYT
Predicted secondary structure



































SS confidence





































































Known secondary structure (DSSP) TTSS


SS

SS
SSSS
SS
S
BB

S
TT
T

TTS
T

 .........990.........1000.........1010.........1020.........1030.........1040.........1050
Sequence RETLGKHEGLGGNVGVYVGVMYEEYQLYASAEQALGRALAIAGSPASIANRVSYFCNFHGPSMAVDTMCS
Predicted secondary structure



































SS confidence





































































Known secondary structure (DSSP) GGGSS
TTSSS






STSS






TT

S


TTT
 .........1060.........1070.........1080.........1090.........1100.........1110.........1120
Sequence SSLTGIHLACHSLQRGECEVAIAGGVNVSIHPNKYLYLSQGKFASSKGRCESFGEGGDGYVPGEGVGAVL
Predicted secondary structure
























SS confidence





































































Known secondary structure (DSSP) TS
S


STT
S
TT
SS

SSSS




BB
 .........1130.........1140.........1150.........1160.........1170.........1180.........1190
Sequence LKPLARAIADGDHIYGVIKGSAINHGGKTNGYTVPNPHSQSRVIRRAFEEAGIHPRTVSYIEAHGTGTSL
Predicted secondary structure





























SS confidence





































































Known secondary structure (DSSP) T





S
SSTT


T

GGG




TT
TT
 .........1200.........1210.........1220.........1230.........1240.........1250.........1260
Sequence GDPIEIAGLTKTFQEYTKENQFCAIGSAKSNIGHGESAAGIAGLTKILLQMKYKRLVPSLHSRTLNPNID
Predicted secondary structure
































SS confidence





































































Known secondary structure (DSSP) TTT



S

T
B
SSST


SS
SS

TTS
 .........1270.........1280.........1290.........1300.........1310.........1320.........1330
Sequence FSKTPFVVQQELAEWKRPVIEIDGVTREYARIAGISSFGAGGANAHLVIEEYIEAEHRPPSSISSKNPAV
Predicted secondary structure

















































SS confidence





































































Known secondary structure (DSSP) TTTSS

S





TT




SSS




S






SSSS
 .........1340.........1350.........1360.........1370.........1380.........1390.........1400
Sequence IVLSAKNKDRLREQVQRLLSAIREQVLTDNDLAEIAYTLQVGREAMEERFAVIVKSISELEAKLTYYLKD
Predicted secondary structure






















SS confidence





































































Known secondary structure (DSSP) SSTT

TTSS


SSSS
 .........1410.........1420.........1430.........1440.........1450.........1460.........1470
Sequence EADSPDLFTGQVKRNKETMDVFAADEDLQQAIDTWITKGKYAKILQMWVQGLIFDWNKLYGDTKPRRISL
Predicted secondary structure


































SS confidence





































































Known secondary structure (DSSP)
S

TT
SSS
SS
T
TTT



GGGGSSS







 .........1480..
Sequence PAYPFARERYWL
Predicted secondary structure











SS confidence











Known secondary structure (DSSP)










Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


Phyre is now FREE for commercial users!

All images and data generated by Phyre2 are free to use in any publication with acknowledgement

Accessibility Statement
Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
© Structural Bioinformatics Group, Imperial College, London
Michael Sternberg 
Disclaimer
Terms and Conditions
Structural Biology Group logo Imperial logo
BBSRC logo
Phyre2 is part of Genome3D