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 Protein Homology/analogY Recognition Engine V 2.0


 

Fold library entry viewer: c7zpiA_

Fold library idPDB HeaderMoleculeTitle
c7zpiA_5.91PDB header: rna binding proteinChain: A: PDB Molecule: endoribonuclease dicer;


Added to library: Sat Nov 19 14:13:50 2022
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence RPGSTKRRQCYPKAIPECLRESYPKPDQPCYLYVIGMVLTTPLPDELNFRRRKLYPPEDTTRCFGILTAK
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Known secondary structure (DSSP)
TT
TT




TTTBT



TTS


TTTSTT





GGGSS
SS
 .........80.........90.........100.........110.........120.........130.........140
Sequence PIPQIPHFPVYTRSGEVTISIELKKSGFTLSQQMLELITRLHQYIFSHILRLEKPALEFKPTGAESAYCV
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Known secondary structure (DSSP)






TT


TTS



TT
TTT
SB

 .........150.........160.........170.........180.........190.........200.........210
Sequence LPLNVVNDSGTLDIDFKFMEDIEKSEARIGIPSTKYSKETPFVFKLEDYQDAVIIPRYRNFDQPHRFYVA
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Known secondary structure (DSSP) STTSS


GGGTS






SSS




GGGTTTTTS
TTS


 .........220.........230.........240.........250.........260.........270.........280
Sequence DVYTDLTPLSKFPSPEYETFAEYYKTKYNLDLTNLNQPLLDVDHTSSRLNLLTPRHLVPELCAIHPIPAS
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Known secondary structure (DSSP) SS

TTSB
SSTT
SB



S
TT








SS




GGG
 .........290.........300.........310.........320.........330.........340.........350
Sequence LWRKAVCLPSILYRLHCLLTAEELRAQTASDAGVGVRSLPLGPNPGLILQALTLSNASDGFNLERLEMLG
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Known secondary structure (DSSP)

S
SS





TB
GGG
SS

S
 .........360.........370.........380.........390.........400.........410.........420
Sequence DSFLKHAITTYLFCTYPDAHEGRLSYMRSKKVSNCNLYRLGKKKGLPSRMVVSIFDPPVNWLPPGYVVNQ
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Known secondary structure (DSSP)
TT

TSTT
B
S





TT

 .........430.........440.........450.........460.........470.........480.........490
Sequence DLHTEQCIADKSIADCVEALLGCYLTSCGERAAQLFLCSLGLKVLAEKTLNHLISGFETFEKKINYRFKN
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Known secondary structure (DSSP)
TTTT




TTTTT


SS
 .........500.........510.........520.........530.........540.........550.........560
Sequence KAYLLQAFTHASYHYNTITDCYQRLEFLGDAILDYLITKHLYEDPRQHSPGVLTDLRSALVNNTIFASLA
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Known secondary structure (DSSP) B
TT
TT

SS

T
TT


S
 .........570.........580.........590.........600.........610.........620.........630
Sequence VKYDYHKYFKAVSPELFHVIDDFVKFQLEKIEVPKAMGDIFESLAGAIYMDSGMSLEVVWQVYYPMMQPL
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Known secondary structure (DSSP) TT
B







TTS
 .........640.........650.........660.........670.........680.........690.........700
Sequence IEKFSANVPRSPVRELLEMEPETAKFSPAERTYDGKVRVTVEVVGKGKFKGVGRSYRIAKSAAARRALRS
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Known secondary structure (DSSP) S



STTT



TTS
TTTSS
 .....
Sequence LKANQ
Predicted secondary structure

SS confidence




Known secondary structure (DSSP)


Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


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Accessibility Statement
Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
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