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 Protein Homology/analogY Recognition Engine V 2.0


 

Fold library entry viewer: c7zdkD_

Fold library idPDB HeaderMoleculeTitle
c7zdkD_3.01PDB header: membrane proteinChain: D: PDB Molecule: atp-binding/permease protein cydd;


Added to library: Sat Apr 22 13:06:55 2023
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence MNKSRQKELTRWLKQQSVISQRWLNISRLLGFVSGILIIAQAWFMARILQHMIMENIPREALLLPFTLLV
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Known secondary structure (DSSP)

GGGGTS


GGGG
 .........80.........90.........100.........110.........120.........130.........140
Sequence LTFVLRAWVVWLRERVGYHAGQHIRFAIRRQVLDRLQQAGPAWIQGKPAGSWATLVLEQIDDMHDYYARY
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Known secondary structure (DSSP)
TTS
TTTT
 .........150.........160.........170.........180.........190.........200.........210
Sequence LPQMALAVSVPLLIVVAIFPSNWAAALILLGTAPLIPLFMALVGMGAADANRRNFLALARLSGHFLDRLR
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Known secondary structure (DSSP)
TTTT
 .........220.........230.........240.........250.........260.........270.........280
Sequence GMETLRIFGRGEAEIESIRSASEDFRQRTMEVLRLAFLSSGILEFFTSLSIALVAVYFGFSYLGELDFGH
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Known secondary structure (DSSP) TTT
TS

SSS
 .........290.........300.........310.........320.........330.........340.........350
Sequence YDTGVTLAAGFLALILAPEFFQPLRDLGTFYHAKAQAVGAADSLKTFMETPLAHPQRGEAELASTDPVTI
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Known secondary structure (DSSP)
SS


ST









B

S
SS


 .........360.........370.........380.........390.........400.........410.........420
Sequence EAEELFITSPEGKTLAGPLNFTLPAGQRAVLVGRSGSGKSSLLNALSGFLSYQGSLRINGIELRDLSPES
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Known secondary structure (DSSP)
TTS

TT


TTSSTSSSSTTTTTB
 .........430.........440.........450.........460.........470.........480.........490
Sequence WRKHLSWVGQNPQLPAATLRDNVLLARPDASEQELQAALDNAWVSEFLPLLPQGVDTPVGDQAARLSVGQ
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Known secondary structure (DSSP) GGG
SS



SSBTTS
TT

TT
TTTTTTSTTGGG
B
SSSSS


 .........500.........510.........520.........530.........540.........550.........560
Sequence AQRVAVARALLNPCSLLLLDEPAASLDAHSEQRVMEALNAASLRQTTLMVTHQLEDLADWDVIWVMQDGR
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Known secondary structure (DSSP) SS

SSTT
S

TTSS
S

SS
SSSSTT
 .........570.........580........
Sequence IIEQGRYAELSVAGGPFATLLAHRQEEI
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Known secondary structure (DSSP)
S
SS





Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


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Accessibility Statement
Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
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Michael Sternberg 
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