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 Protein Homology/analogY Recognition Engine V 2.0


 

Fold library entry viewer: c7yzpC_

Fold library idPDB HeaderMoleculeTitle
c7yzpC_4.00PDB header: dna binding proteinChain: C: PDB Molecule: nuclease sbccd subunit c;


Added to library: Sat Aug 20 09:11:52 2022
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence MKILSLRLKNLNSLKGEWKIDFTREPFASNGLFAITGPTGAGKTTLLDAICLALYHETPRLSNVSQSQND
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Known secondary structure (DSSP)

SSSS

STTSSTT
S




STTSSTTS

SSSS

SSS


 .........80.........90.........100.........110.........120.........130.........140
Sequence LMTRDTAECLAEVEFEVKGEAYRAFWSQNRARNQPDGNLQVPRVELARCADGKILADKVKDKLELTATLT
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Known secondary structure (DSSP)
S
TT

TTBGGG
SSS
B


TTT


S
 .........150.........160.........170.........180.........190.........200.........210
Sequence GLDYGRFTRSMLLSQGQFAAFLNAKPKERAELLEELTGTEIYGQISAMVFEQHKSARTELEKLQAQASGV
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Known secondary structure (DSSP) S

TTT


TT
TTS
SS
TTTTS
 .........220.........230.........240.........250.........260.........270.........280
Sequence TLLTPEQVQSLTASLQVLTDEEKQLTHQKLRENTTSQGEIRQQLKQDADNRQQQQTLMQQIAQMTQQVED
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Known secondary structure (DSSP)





 .........290.........300.........310.........320.........330.........340.........350
Sequence WGYLNSLIGSKEGDKFRKFAQGLTLDNLVHLANQQLTRLHGRYLLQRKASEALEVEVVDTWQADAVRDTR
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Known secondary structure (DSSP) S

TTS
TTT
TT
S
SS

TTTTS
TT
 .........360.........370.........380.........390.........400.........410.........420
Sequence TLSGGESFLVSLALALALSDLVSHKTRIDSLFLDEGFGTLDSETLDTALDALDALNASGKTIGVISHVEA
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Known secondary structure (DSSP) S

TTTT




TTGGGS
TTSS



 .........430.........440........
Sequence MKERIPVQIKVKKINGLGYSKLESTFAV
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Known secondary structure (DSSP)
S



SSSS


TTTB


Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


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Accessibility Statement
Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
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Michael Sternberg 
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